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cn_combo_scaffold_1770_23

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: 25491..26087

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003751B17 similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 190.0
  • Bit_score: 203
  • Evalue 2.00e-49
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 192.0
  • Bit_score: 143
  • Evalue 8.90e-32
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADZ80833.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacteriu similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 192.0
  • Bit_score: 143
  • Evalue 4.40e-31

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Taxonomy

Sphingobacterium sp. 21 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGTGGCGTAATTTGACCGAAGCAGAAGCAGATACGCTGATCGCTGTCGCCGACGGCGACAGGAATGCTTTTGCCCGGCTGTTCTACCGCTACCACCAGGAGCTGGGTGAATATGTCTACAGGCTCACCAAATCCAGAACAATTTCCGAGGAGATCGTCCAGGATGCGTTTATGAAGGTATGGGTCAACCGCTCCGTGCTGCCCGGCATCCGGAGCTTCAGAGCCTACCTGTTCACCATTACGCGCAATCATGCTTTTAATACGCTTCGGGACGAAAGCAGGAAAGCATTCTTAAGCGAAGAATTGTCGCAGGACCTGTTCCTGGTCGAAGACACGGACCATACGGCCGAAGATGAAGAGCTCTACGGGATCGTAGAAAAGGCCGTTGCCCGGCTGCCTCGCCAGCAACAAAAGGTCTGGCGGATGAATAAAGAAGAAGGTCTCCCCTACCAGCAGATTGCAGATAAGCTCCAGCTTTCCCGCGAGACCGTCAAGCGCCATATCGCGCTGGCCATGGCGTCTGTGCTCAGGTATGTAAAAGTGCATCGCAACACGTTCCTGCTGCTGGGCCTGAAATTTTCCGTTTACTGGTTGTAG
PROTEIN sequence
Length: 199
MWRNLTEAEADTLIAVADGDRNAFARLFYRYHQELGEYVYRLTKSRTISEEIVQDAFMKVWVNRSVLPGIRSFRAYLFTITRNHAFNTLRDESRKAFLSEELSQDLFLVEDTDHTAEDEELYGIVEKAVARLPRQQQKVWRMNKEEGLPYQQIADKLQLSRETVKRHIALAMASVLRYVKVHRNTFLLLGLKFSVYWL*