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cn_combo_scaffold_2142_8

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(6939..9098)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VVY0_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 716.0
  • Bit_score: 679
  • Evalue 3.40e-192
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 716.0
  • Bit_score: 679
  • Evalue 9.60e-193
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:ACT91436.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 716.0
  • Bit_score: 679
  • Evalue 4.80e-192

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2160
ATGAGAGAACTGATAAGGTTTGGGTTATATCTCAGACAACGGTGGTTAATTTGGGTGCTGGTTCCCCTGGCTACCCTGGTGCTGTGCTATTTCCTGGCCTCCCGGTTGCCCGACGTATATCGTTCAAAGGGCAGCATTGCGACCGGCCTGGTAGACAAAACCGGGCAGATCCTGTCGTTGAATGAGAACGTCGAGCAGGATTCGGAGCTGAACCGGAAATTCGAAAATCTCATTCAACTGATCAAGCTGAAGAAGGTACTCGACCAGGTTTCCTACAACCTGGTTATCCACGATCTTACCGCACAGCCGGGGCAGGCTTTCAGGGAGGTGCCGGATGATGCCGATCCGGGTTTCCGCGAAAAGGCAGTGGGGCTTCTGCGCCGGAAACTGTCCGCTTCGGAAGAATTTTATCCGTCGGGAAAGGACGAGCTGCGGATAGCGGAGCTGATCGAAGATATGGAATATGATGCCGGTTCAATTCTCAAAAAGCTCAGGATAGGCCGCATTTCGAACAGCGATTACATAGAAGTGGAATTTGAGGCCGAGCATCCCGGGCTCACTGCCTATGTGGTGAATACGCTCATCTCCGAATTTCTGAAGATATATGCGGAGCGGATAAAGAGCAGCAGCGAGAGATCATTGGACTTCCTGGAAAAGTTTATGCTGCAAAAGCTTGCCGCCCTCAACCAGAAAATGGAGGAGCTGAAAGATTTTAAGATACGCAACCGCGTGCTTAACCTGAACGAACAGGCCAGGAGCCTGTACGGCCACATCATCGATTTCGAAACACGCAGGGAGATAACAAAAAAAGACATCATCGCTTACGGGGCCGCACTGAAGAACATTGACAACCGATTTAATCCGGCCGACAGGCAATACCTCGAAAGCTCCATGGCGCTGATCAACCAGCATATTGCAGAAACCAGGGAGGAACTAAATGCCGTCAATGACCTTTATATCCGGAGCAATTTTAATCCTGTGTATAAAACCAGGGTAGACTCAATACAGAAAGTCCTGAGTGCCAGGATTATGGAGTCGTCGGATAAGTATATCTATAACCCGCTGAACGTCAAGGAAAACCTGGTTAACCATAAGCTGGAGCTTGAGATTTCGCTCGAGCTTGCCCGGAACAGCATCAAGACGATAGAGGATGAGATCAGGCGGCTGAACGGGAAATTCGACGGGATGGTCCCTAGCGAAGCCAGTATTCAGCAGTATGAGACGAGCATAGACATAGCCGGGAAAGAATACATGGAAGCGCTTCAGCGGTATAATGCTGCCAGGCTGGAGTCGTTTAACCCGATCGCGCTCAAGCAGGTGGAAAAAGCCTCGAACGGTATAAAGCTTCCTTCCAAGAAAAGGATCCTGGTCCTTTTATCGGGACTGGTGAGCCTTGCCGTTTGCCTGTTCGTTTTGTTCGTGCTGTATTATCTCGACAATGCCATCCGTGTGCCGCAGCAGCTGGCAGACCAGACCGGGGCGCCGGTTCTGGGGTATCTGAATAAGATAAGAGGCCTTACCGATCCGGCACAGCTCGATAGCGCAAAATCCGACGGCCCGATAGCCCGGTTCCGCAGCCTGGTACGATCGGTCAGGTTTGAAATAGACAACGAAGGGTACGGATCCAAAATAATTGCCGTAACCTCGCTGGCGGAGGGCAGCGGGAAAACCATTGTGGTAAATGGCCTGGCGTGGGCCTACCGGCGGATCAACCAGCGCGTGCTGGTGATCGACGGCAATTTCGGGAATCCGGATATCACAAGGGAAAGCGGAAAAACGGGCTACCTGGAGGATTTCCTGGCTGGGCAGGAGCTGGATGCCGGCGGCAGCAACCCGGTAATCCTCGGTACGCGCGGAGGAGATGTTTCTTTGCTCGAGCTGATCGGTGAAAAGCAGCTTCAAAGCAAGCTCGCAGCGCTCAGGACGCAGTTTGACGTGGTGATTATCGAAACAGGGTCCCTGAGAAGCCTTCATAAAGCAAAAGAATGGATTACCTATGCCGACAGGGTAATAGGCGTATTCCCGGCCGGGCGCTCGCTCGGTGAGCGTGACGAAGAGAATGTCAGGTACCTGCGCAACCGCGGCGCCATATTTGCAGGCTGGGTACTGACCAATGCCGACGCAGCGGCGTGGGGCGGCAGCGCCAATGACGAAAAATAA
PROTEIN sequence
Length: 720
MRELIRFGLYLRQRWLIWVLVPLATLVLCYFLASRLPDVYRSKGSIATGLVDKTGQILSLNENVEQDSELNRKFENLIQLIKLKKVLDQVSYNLVIHDLTAQPGQAFREVPDDADPGFREKAVGLLRRKLSASEEFYPSGKDELRIAELIEDMEYDAGSILKKLRIGRISNSDYIEVEFEAEHPGLTAYVVNTLISEFLKIYAERIKSSSERSLDFLEKFMLQKLAALNQKMEELKDFKIRNRVLNLNEQARSLYGHIIDFETRREITKKDIIAYGAALKNIDNRFNPADRQYLESSMALINQHIAETREELNAVNDLYIRSNFNPVYKTRVDSIQKVLSARIMESSDKYIYNPLNVKENLVNHKLELEISLELARNSIKTIEDEIRRLNGKFDGMVPSEASIQQYETSIDIAGKEYMEALQRYNAARLESFNPIALKQVEKASNGIKLPSKKRILVLLSGLVSLAVCLFVLFVLYYLDNAIRVPQQLADQTGAPVLGYLNKIRGLTDPAQLDSAKSDGPIARFRSLVRSVRFEIDNEGYGSKIIAVTSLAEGSGKTIVVNGLAWAYRRINQRVLVIDGNFGNPDITRESGKTGYLEDFLAGQELDAGGSNPVILGTRGGDVSLLELIGEKQLQSKLAALRTQFDVVIIETGSLRSLHKAKEWITYADRVIGVFPAGRSLGERDEENVRYLRNRGAIFAGWVLTNADAAAWGGSANDEK*