ggKbase home page

cn_combo_scaffold_446

Alias: MES20_2

Search features with annotation key words

Displaying items 31-60 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_446_31
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30014..30409
DNA (396bp) protein (132aa)
succinate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B7EB8
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EHH11519.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
succinate dehydrogenase hydrophobic membrane anchor protein
cn_combo_scaffold_446_32
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30414..32243
DNA (1830bp) protein (610aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
succinate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F133A
succinate dehydrogenase, flavoprotein subunit
cn_combo_scaffold_446_33
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32247..32690
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036FAD14
Uncharacterized protein {ECO:0000313|EMBL:KFL27749.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
cn_combo_scaffold_446_34
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32701..33480
DNA (780bp) protein (260aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobia
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1318A
cn_combo_scaffold_446_35
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33482..34117
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EC50E
UPF0502 protein X743_22895 {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
hypothetical protein
cn_combo_scaffold_446_36
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34232..35350)
DNA (1119bp) protein (373aa)
leucine dehydrogenase (EC:1.4.1.9) rbh
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036690B0
Leucine dehydrogenase {ECO:0000313|EMBL:EKF19122.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pa
cn_combo_scaffold_446_37
Hoeflea sp. 108, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35626..35778)
DNA (153bp) protein (51aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037AE4CD
cn_combo_scaffold_446_38
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35965..36939
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000371C368
AraC type helix-turn-helix-domain containing protein
AraC family transcriptional regulator {ECO:0000313|EMBL:ESZ23222.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
cn_combo_scaffold_446_39
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37079..37504)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379491D
Osmotically inducible, stress-inducible membrane protein {ECO:0000313|EMBL:CDX22832.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobi
OsmC subfamily peroxiredoxin
cn_combo_scaffold_446_40
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37695..38051
DNA (357bp) protein (119aa)
dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000372E1FF
Dehydrogenase {ECO:0000313|EMBL:ESY98163.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A0
hypothetical protein
cn_combo_scaffold_446_41
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38319..39572)
DNA (1254bp) protein (418aa)
2-octaprenyl-6-methoxyphenyl hydroxylase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003650804
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:CDX25896.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Me
2-octaprenyl-6-methoxyphenyl hydroxylase
cn_combo_scaffold_446_42
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39663..40526
DNA (864bp) protein (288aa)
acyl-CoA thioesterase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003657956
acyl-CoA thioesterase
Acyl-CoA thioesterase II {ECO:0000313|EMBL:BAB50950.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (s
cn_combo_scaffold_446_43
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40749..41087
DNA (339bp) protein (113aa)
UPI0003D00B47 related cluster n=1 Tax=unknown RepID=UPI0003D00B47
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:ESX97833.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
nitrogen regulatory protein P-II
cn_combo_scaffold_446_44
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41116..42492
DNA (1377bp) protein (459aa)
ammonia channel protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EC39A
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alha
amtB; ammonium transporter rbh
cn_combo_scaffold_446_45
unknown

Not on your lists

comp(42617..42829)
DNA (213bp) protein (71aa)

This feature has no annotations

cn_combo_scaffold_446_46
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43096..44010
DNA (915bp) protein (305aa)
UPI0003CF6E6C related cluster n=1 Tax=unknown RepID=UPI0003CF6E6C
Uncharacterized protein {ECO:0000313|EMBL:ESY74441.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_446_47
Mesorhizobium sp. LNJC391B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44170..46815
DNA (2646bp) protein (882aa)
cell division protein FtsK n=1 Tax=Hoeflea sp. 108 RepID=UPI0003729B5D
Cell division protein FtsK {ECO:0000313|EMBL:ESY30466.1}; TaxID=1287273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
cell division protein FtsK
cn_combo_scaffold_446_48
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46928..47587
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F581D
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sour
hypothetical protein
cn_combo_scaffold_446_49
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47739..48545
DNA (807bp) protein (269aa)
exodeoxyribonuclease III n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EB478
Exodeoxyribonuclease III {ECO:0000313|EMBL:ESZ26216.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
exodeoxyribonuclease III Xth
cn_combo_scaffold_446_50
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48883..49338)
DNA (456bp) protein (152aa)
cAMP-dependent protein kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B5EE0
cAMP-dependent protein kinase {ECO:0000313|EMBL:ESY34323.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
hypothetical protein
cn_combo_scaffold_446_51
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49413..50096)
DNA (684bp) protein (228aa)
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D692C
two-component response regulator
Transcriptional regulator {ECO:0000313|EMBL:ESZ40495.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
cn_combo_scaffold_446_52
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50141..50773
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C432B
Uncharacterized protein {ECO:0000313|EMBL:ESW80311.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
ErfK/YbiS/YcfS/YnhG family protein
cn_combo_scaffold_446_53
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50875..51123)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037201A0
Uncharacterized protein {ECO:0000313|EMBL:ESZ40493.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_446_54
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51258..52175
DNA (918bp) protein (306aa)
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000381A747
LysR family transcriptional regulator
LysR substrate-binding protein {ECO:0000313|EMBL:ADV10206.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
cn_combo_scaffold_446_55
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52182..52853)
DNA (672bp) protein (224aa)
50S ribosomal protein L11 methyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036CC4F1
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:EXL10299.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aqu
putative methyltransferase
cn_combo_scaffold_446_56
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52850..53284)
DNA (435bp) protein (145aa)
ubiquinol-cytochrome C reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FBC30
ubiquinol-cytochrome C reductase
Ubiquinol-cytochrome C reductase {ECO:0000313|EMBL:AJY47689.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella e
cn_combo_scaffold_446_57
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53308..53604)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F5BC4
YciI-like protein {ECO:0000313|EMBL:KFB08790.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basalt
hypothetical protein
cn_combo_scaffold_446_58
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53628..54611)
DNA (984bp) protein (328aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein (EC:1.1.1.94)
glycerol-3-phosphate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003737C68
cn_combo_scaffold_446_59
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(54608..55714)
DNA (1107bp) protein (369aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-th
glycoprotease family metalloendopeptidase (EC:3.4.24.57)
protein kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003791542
cn_combo_scaffold_446_60
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55792..56721
DNA (930bp) protein (310aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase (EC:2.5.1.61)
porphobilinogen deaminase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003611284
Displaying items 31-60 of 88 in total

View Taxonomy