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cn_combo_scaffold_446

Alias: MES20_2

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Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_446_1
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..2232
DNA (2232bp) protein (744aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1287298 species="Bacteria; Proteobacteria; Alp
aconitate hydratase (EC:4.2.1.3)
aconitate hydratase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035DB949
cn_combo_scaffold_446_2
unknown

Not on your lists

3114..3272
DNA (159bp) protein (53aa)

This feature has no annotations

cn_combo_scaffold_446_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3592..4560
DNA (969bp) protein (323aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=653930 species="Bacteria; Pr
malate dehydrogenase (EC:1.1.1.37)
malate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003682081
cn_combo_scaffold_446_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4570..5766
DNA (1197bp) protein (399aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
malate--CoA ligase subunit beta n=1 Tax=Hoeflea sp. 108 RepID=UPI000369E9BD
cn_combo_scaffold_446_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5772..6677
DNA (906bp) protein (302aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhiz
sucD; succinyl-CoA synthetase (ADP-forming) subunit alpha (EC:6.2.1.5)
succinyl-CoA synthetase subsunit alpha n=1 Tax=Hoeflea sp. 108 RepID=UPI000367CCFF
cn_combo_scaffold_446_6
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6806..9793
DNA (2988bp) protein (996aa)
2-oxoglutarate decarboxylase, component of the 2-oxoglutarate dehydrogenase complex, thiamin-binding {ECO:0000313|EMBL:CDX41866.1}; EC=1.2.4.2 {ECO:0000313|EMBL:CDX41866.1};; TaxID=1505933 species="Ba
2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2)
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003766DA1
cn_combo_scaffold_446_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9818..11083
DNA (1266bp) protein (422aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
dihydrolipoamide succinyltransferase (EC:2.3.1.61)
dihydrolipoamide succinyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI000365D047
cn_combo_scaffold_446_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11193..11606
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D0T6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79709.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
cn_combo_scaffold_446_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11643..12086
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036CD7B0
putative glyoxalase family protein
Putative glyoxalase family protein {ECO:0000313|EMBL:AHK42639.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.
cn_combo_scaffold_446_10
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12083..12727
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000381002D
Putative threonine efflux protein {ECO:0000313|EMBL:EJM99828.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacteri
putative amino acid efflux protein, LysE family
cn_combo_scaffold_446_11
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12727..13221
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00038254A6
Uncharacterized protein {ECO:0000313|EMBL:ESZ40541.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_446_12
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13218..13973
DNA (756bp) protein (252aa)
Glucose-1-dehydrogenase {ECO:0000313|EMBL:ESZ69407.1}; EC=1.1.1.47 {ECO:0000313|EMBL:ESZ69407.1};; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
glucose-1-dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003607038
oxidoreductase rbh
cn_combo_scaffold_446_13
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14000..15406
DNA (1407bp) protein (469aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacte
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
dihydrolipoamide dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003774B56
cn_combo_scaffold_446_14
unknown

Not on your lists

15499..15726
DNA (228bp) protein (76aa)

This feature has no annotations

cn_combo_scaffold_446_15
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15983..17053)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D98D0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB43547.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
cn_combo_scaffold_446_16
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17169..18107)
DNA (939bp) protein (313aa)
tyrosine recombinase XerC n=1 Tax=Hoeflea sp. 108 RepID=UPI0003620269
xerC; site-specific tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium lo
cn_combo_scaffold_446_17
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18174..18782
DNA (609bp) protein (203aa)
16S rRNA-processing protein RimM n=1 Tax=Hoeflea sp. 108 RepID=UPI000363B136
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
16S rRNA processing protein RimM
cn_combo_scaffold_446_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18782..19477
DNA (696bp) protein (232aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N1)-methyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037FAE38
cn_combo_scaffold_446_19
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19604..20359)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367D923
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH85527.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
cn_combo_scaffold_446_20
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


20772..21308
DNA (537bp) protein (179aa)
50S ribosomal protein L19 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DC7A8
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
50S ribosomal protein L19
cn_combo_scaffold_446_21
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21925..22722
DNA (798bp) protein (266aa)
amino acid ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E531E
Bacterial extracellular solute-binding s, 3 family protein {ECO:0000313|EMBL:AID33293.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhiz
amino acid ABC transporter substrate-binding protein
cn_combo_scaffold_446_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22781..23590
DNA (810bp) protein (270aa)
amino acid ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D633A
Polar amino acid ABC transporter inner membrane subunit {ECO:0000313|EMBL:EHK58566.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizob
amino acid ABC transporter permease
cn_combo_scaffold_446_23
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23687..24232
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D4673
Membrane protein {ECO:0000313|EMBL:ESY92390.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC20
MgtC/SapB transporter
cn_combo_scaffold_446_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24239..24712)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003778C53
putative MarR family transcriptional regulator
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:AGB72583.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gr
cn_combo_scaffold_446_25
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24784..25677
DNA (894bp) protein (298aa)
haloalkane dehalogenase (EC:3.8.1.5) rbh
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036573F4
Putative haloalkane dehalogenase {ECO:0000313|EMBL:CAK03489.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
cn_combo_scaffold_446_26
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25770..25886
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HL85_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESZ26239.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_446_27
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25962..27371
DNA (1410bp) protein (470aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D2CFF
3-isopropylmalate dehydratase, large subunit
cn_combo_scaffold_446_28
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27537..28760
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F5632
hypothetical protein
Mll4270 protein {ECO:0000313|EMBL:BAB50966.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
cn_combo_scaffold_446_29
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28836..29186)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003825B5B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH85539.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
cn_combo_scaffold_446_30
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29596..30012
DNA (417bp) protein (139aa)
Succinate dehydrogenase cytochrome b556 subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EJD5_9RHIZ
Succinate dehydrogenase cytochrome b556 subunit {ECO:0000313|EMBL:CDX52441.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sou
succinate dehydrogenase membrane anchor subunit
Displaying items 1-30 of 88 in total

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