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cn_combo_scaffold_446_16

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(17169..18107)

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerC n=1 Tax=Hoeflea sp. 108 RepID=UPI0003620269 similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 312.0
  • Bit_score: 573
  • Evalue 1.10e-160
xerC; site-specific tyrosine recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 312.0
  • Bit_score: 528
  • Evalue 1.20e-147
Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium lo similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 312.0
  • Bit_score: 528
  • Evalue 5.90e-147

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGCAGGAATTCCTCATCGCCGCAAAACCCGACCTCCAGGCCGCGCGCGAGCGCTGGCTGAAGGCACTTGCCGGCGAACGCCGGCTGTCGGCATTGACGGTCGACGCCTACGAGCGCGACACCCGGCAGTTCCTGCAATTCCTCACCGGCCACAACGGCGGCCCACCCGGCATATCAGACATAAGCAACCTCCGCCCCGCCGACCTGCGCGGCTTCCTCGCCACGCGCCGTGCCGCGGGCGCCGGCGCCCGCACCCTCGGTCGCGGGCTCGCGGGTGTCCGCTCGCTGCTGCGCTTTCTCGAGCGCGAAGGCCTGGTCAACGCCGCCGGTTCCGCAGCGCTCCGCGCGCCGAAACAGCCGAAATCGCTGCCCAAGCCGCTGACGGCGGTCGACGCCAAGCGCGTGGTGTCTGCCGGCGAACAACTGGCCGAGGAGCCGTGGATCGCCGCCCGCAACGCCGCCGTGCTCACCCTGCTCTACGGTTCGGGCCTGCGCATCTCCGAGGCGCTCGGCCTGTCCGGGGCCGAACTCGCCTCGCCCTCCGACACGGTCCTGCGCGTCACCGGCAAGGGCGGCAAGACGCGGCTGGTGCCGGTGCTCCCGGTCGCGCTGCAGGCGGTCGCGGAATACCGCAAGCTTTGCCCGTACCTTCTTGGCGCCGACGGCGCACTGTTCCGCGGCGCACGGGGCGGCCAGCTCGACCCGGGCATCATCCAGCGCGAGATGCGCAAGCTGCGCTCGGCGCTCAACCTGCCCGATACAGCAACGCCCCACGCCCTGCGCCACTCGTTCGCCACGCACCTGCTCGGCCGCGGCGGCGATCTCCGCACCATCCAGGAACTGCTCGGCCACGCCAGCCTGTCGACCACCCAGATCTACACCGGCGTCGATACCGCCCGCCTGCTCGAGATCTACGAGGCGGCGCATCCGCGCGCTTAG
PROTEIN sequence
Length: 313
MQEFLIAAKPDLQAARERWLKALAGERRLSALTVDAYERDTRQFLQFLTGHNGGPPGISDISNLRPADLRGFLATRRAAGAGARTLGRGLAGVRSLLRFLEREGLVNAAGSAALRAPKQPKSLPKPLTAVDAKRVVSAGEQLAEEPWIAARNAAVLTLLYGSGLRISEALGLSGAELASPSDTVLRVTGKGGKTRLVPVLPVALQAVAEYRKLCPYLLGADGALFRGARGGQLDPGIIQREMRKLRSALNLPDTATPHALRHSFATHLLGRGGDLRTIQELLGHASLSTTQIYTGVDTARLLEIYEAAHPRA*