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cn_combo_scaffold_446_17

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 18174..18782

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Hoeflea sp. 108 RepID=UPI000363B136 similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 202.0
  • Bit_score: 377
  • Evalue 1.00e-101
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 202.0
  • Bit_score: 305
  • Evalue 5.20e-80
16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 202.0
  • Bit_score: 300
  • Evalue 3.40e-79

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCCAAGCTCCAGAATCCAGTTCAGATGGCCGTGATCGGCGCGCCCCACGGCATCAAGGGCGAACTCAGGGTGAAGACCTTCACCGGCGACCCGCTGGCACTGGGCGACTACGGGCCGCTCTACGCCAAGGATGGGCGCGCCTTCGAGATCGCCGCCATTCGACCCGCCAACGAGGTGGTGGTGGTCCGCTTCAAGGGCGTGAACGACCGCAACGCGGCCGAGGCGCTGACCAATGTCGAGCTGTTCGTCGACCGCTCGGCGCTGCCGGACGATGCCGACGAGGGCGAATTCTACCACACCGACCTGATGGGGCTCGAGGTGCGCGACGAGACCGGCGCCAAGGTCGGCAACGTGATCGCGGTGCAGAATTTCGGCGGCGGCGACATCCTCGACATCCAGTACCAGGGCCGCAAGGGCGTGCTGATCCCGTTCACGGAAGCTGCCGTGCCGGTGGTCGATATCAAGGGCGGTTTCGTCGGTATCGATACCGCCGCCGCCGGGCTGGTGGAGAGCGAGGACGACGAGTTCGGTCCGCCGCCGGAGGAAGGCGAGTTCGACACGCGCAAGCGTCCGCGTGGGCCGAAGGACTCCGGGGGCAATCGCTGA
PROTEIN sequence
Length: 203
MAKLQNPVQMAVIGAPHGIKGELRVKTFTGDPLALGDYGPLYAKDGRAFEIAAIRPANEVVVVRFKGVNDRNAAEALTNVELFVDRSALPDDADEGEFYHTDLMGLEVRDETGAKVGNVIAVQNFGGGDILDIQYQGRKGVLIPFTEAAVPVVDIKGGFVGIDTAAAGLVESEDDEFGPPPEEGEFDTRKRPRGPKDSGGNR*