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cn_combo_scaffold_572

Alias: MES20_5

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_572_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1611)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036453E3
Outer membrane autotransporter barrel domain {ECO:0000313|EMBL:ABS63130.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parv
outer membrane autotransporter
cn_combo_scaffold_572_2
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1860..2162
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003806FD0
helix-turn-helix family protein
Uncharacterized protein {ECO:0000313|EMBL:ABS14420.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (st
cn_combo_scaffold_572_3
Hoeflea sp. 108, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2281..2724
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CE2D9
cn_combo_scaffold_572_4
unknown

Not on your lists

2825..2953
DNA (129bp) protein (43aa)

This feature has no annotations

cn_combo_scaffold_572_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2985..3542)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003827E30
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53946.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
cn_combo_scaffold_572_6
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3748..3975)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000370CEA8
Uncharacterized protein {ECO:0000313|EMBL:ESX64404.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
cn_combo_scaffold_572_7
unknown

Not on your lists

comp(4070..4171)
DNA (102bp) protein (34aa)

This feature has no annotations

cn_combo_scaffold_572_8
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4757..5113
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D6DFB
Uncharacterized protein {ECO:0000313|EMBL:EJN04928.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium
cn_combo_scaffold_572_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5207..8170
DNA (2964bp) protein (988aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003703D3C
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EHK58127.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
PAS sensor protein
cn_combo_scaffold_572_10
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8437..9474
DNA (1038bp) protein (346aa)
phosphonate ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035DA214
Phosphate ABC transporter, phosphate-binding protein {ECO:0000313|EMBL:CCV11114.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium
phosphate ABC transporter substrate-binding protein
cn_combo_scaffold_572_11
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9576..11042
DNA (1467bp) protein (489aa)
phosphate ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CF1E1
Phosphate ABC transporter permease {ECO:0000313|EMBL:ESX22810.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
phosphate ABC transporter permease
cn_combo_scaffold_572_12
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11039..12355
DNA (1317bp) protein (439aa)
phosphate ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000369D52F
Phosphate ABC transporter permease {ECO:0000313|EMBL:ESZ39888.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
phosphate ABC transporter permease
cn_combo_scaffold_572_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12379..13200
DNA (822bp) protein (274aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-tran
phosphate ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E8494
phosphate ABC transporter ATPase
cn_combo_scaffold_572_14
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13238..13942
DNA (705bp) protein (235aa)
PhoU family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003733F56
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
phosphate transport system regulatory protein PhoU
cn_combo_scaffold_572_15
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14117..14830
DNA (714bp) protein (238aa)
chemotaxis protein CheY n=1 Tax=Hoeflea sp. 108 RepID=UPI000369A6EF
Response regulator in two-component regulatory system with PhoR (Or CreC), regulation of Pi uptake (OmpR family) {ECO:0000313|EMBL:CCV04961.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphapr
phosphate regulon transcriptional regulatory protein PhoB
cn_combo_scaffold_572_16
unknown

Not on your lists

15076..15426
DNA (351bp) protein (117aa)

This feature has no annotations

cn_combo_scaffold_572_17
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15734..16525
DNA (792bp) protein (264aa)
ErfK/YbiS/YcfS/YnhG family n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R415_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGF71138.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
ErfK/YbiS/YcfS/YnhG
cn_combo_scaffold_572_18
unknown

Not on your lists

16592..16744
DNA (153bp) protein (51aa)

This feature has no annotations

cn_combo_scaffold_572_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16757..17230
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Uncharacterized protein id=3002073 bin=GWF1_Rhodobacteraceae_65_7 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
cn_combo_scaffold_572_20
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17227..17943
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W7W7_9RHOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ23340.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 21
cn_combo_scaffold_572_21
unknown

Not on your lists

18179..18511
DNA (333bp) protein (111aa)

This feature has no annotations

cn_combo_scaffold_572_22
R_RIF_OD1_13_60_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

18682..19569
DNA (888bp) protein (296aa)
Methyltransferase type 11 n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMR6_DESK7
polysaccharide deacetylase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_60_25_curated
type 11 methyltransferase
cn_combo_scaffold_572_23
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19582..20817)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D06E0
Xyl repressor {ECO:0000313|EMBL:CCV04962.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans
ROK family protein
cn_combo_scaffold_572_24
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20947..22113
DNA (1167bp) protein (389aa)
D-xylose ABC transporter, substrate-binding protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KHC7_MESAW
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EZQ14474.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" so
D-xylose ABC transporter, substrate-binding protein
cn_combo_scaffold_572_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22304..23620
DNA (1317bp) protein (439aa)
Inner-membrane translocator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HMC2_9RHIZ
Inner-membrane translocator {ECO:0000313|EMBL:EHK58136.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
inner-membrane translocator
cn_combo_scaffold_572_26
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23636..24424
DNA (789bp) protein (263aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037AA40F
ABC transporter {ECO:0000313|EMBL:CDX34505.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;
ABC-type sugar transport system, ATPase component
cn_combo_scaffold_572_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24488..26095
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E8CAD
CHASE domain protein {ECO:0000313|EMBL:CDX34502.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifar
CHASE domain-containing protein
cn_combo_scaffold_572_28
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26167..26412)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036DB433
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10058.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
cn_combo_scaffold_572_29
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26566..26886)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380D5ED
Uncharacterized protein {ECO:0000313|EMBL:CDX34637.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_572_30
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26988..27983)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000371DE3D
Histidine kinase {ECO:0000313|EMBL:ESW81102.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC28
sensory transduction histidine kinase
Displaying items 1-30 of 75 in total

View Taxonomy