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cn_combo_scaffold_1052

Alias: MES20_16

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1052_1
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..142
DNA (141bp) protein (47aa)
diguanylate phosphodiesterase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036623F4
diguanylate cyclase
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ESZ22909.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
cn_combo_scaffold_1052_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

295..1071
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y0H5_MESOW
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ22528.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
cn_combo_scaffold_1052_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1162..1836
DNA (675bp) protein (225aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN83_9RHIZ
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EHK57800.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
putative transcriptional regulator with cAMP binding domain belongs to HTH Crp family
cn_combo_scaffold_1052_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2205..4187
DNA (1983bp) protein (661aa)
AMP-dependent synthetase and ligase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN84_9RHIZ
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EHK57801.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesor
fadD3; AMP-dependent synthetase/ligase
cn_combo_scaffold_1052_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4184..5008
DNA (825bp) protein (275aa)
ABC branched amino acid transporter family, ATPase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN85_9RHIZ
ABC branched amino acid transporter family, ATPase {ECO:0000313|EMBL:EHK57802.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
braF; High-affinity branched-chain amino acid transport ATP-binding protein BraF
cn_combo_scaffold_1052_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5090..6049
DNA (960bp) protein (320aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN88_9RHIZ
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:EHK57805.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
braD; High-affinity branched-chain amino acid transport system permease protein BraD rbh
cn_combo_scaffold_1052_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6054..7130
DNA (1077bp) protein (359aa)
ABC transporter livM-like permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN89_9RHIZ
ABC transporter livM-like permease {ECO:0000313|EMBL:EHK57806.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
braE; High-affinity branched-chain amino acid transport system permease protein BraE
cn_combo_scaffold_1052_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7204..8514
DNA (1311bp) protein (437aa)
ABC branched amino acid transporter family, periplasmic substrate-binding subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN90_9RHIZ
ABC branched amino acid transporter family, periplasmic substrate-binding subunit {ECO:0000313|EMBL:EHK57807.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyl
branched-chain amino acid ABC transporter periplasmic branched-chain amino acid binding protein
cn_combo_scaffold_1052_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8607..9443
DNA (837bp) protein (279aa)
ABC branched amino acid transporter family, ATPase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HN91_9RHIZ
ABC branched amino acid transporter family, ATPase {ECO:0000313|EMBL:EHK57808.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
livF1; branched-chain amino acid ABC transporter ATPase
cn_combo_scaffold_1052_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9580..9825
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003627D86
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57810.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
cn_combo_scaffold_1052_11
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10120..11418
DNA (1299bp) protein (433aa)
NAD(P) transhydrogenase subunit alpha part 1 {ECO:0000313|EMBL:CDX26691.1}; EC=1.6.1.2 {ECO:0000313|EMBL:CDX26691.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C16CA
cn_combo_scaffold_1052_12
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11418..11846
DNA (429bp) protein (143aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D47586
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:ESY68276.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
hypothetical protein
cn_combo_scaffold_1052_13
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11848..13245
DNA (1398bp) protein (466aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
NAD synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003654314
nicotinamide nucleotide transhydrogenase subunit beta
cn_combo_scaffold_1052_14
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13561..14193)
DNA (633bp) protein (211aa)
lysine transporter LysE n=1 Tax=Hoeflea sp. 108 RepID=UPI000367805B
Lysine transporter LysE {ECO:0000313|EMBL:ESZ23025.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
lysine exporter protein LysE/YggA
cn_combo_scaffold_1052_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14318..14521)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003625A4D
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13145.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
cn_combo_scaffold_1052_16
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14690..15166)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A5CDF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX30585.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
cn_combo_scaffold_1052_17
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15229..15822)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037ABE60
NAD(P)H dehydrogenase (quinone)
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:ABM43808.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
cn_combo_scaffold_1052_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15847..16695)
DNA (849bp) protein (283aa)
GlcNAc transferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A7126
TPR repeat-containing protein {ECO:0000313|EMBL:EHK57790.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
hypothetical protein
cn_combo_scaffold_1052_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16830..17084)
DNA (255bp) protein (85aa)
30S ribosomal protein S21 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F5B41
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
30S ribosomal protein S21
cn_combo_scaffold_1052_20
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17252..18508
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C5F82
Glycosyl hydrolase {ECO:0000313|EMBL:KDP76483.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensife
glycosyl hydrolase rbh
cn_combo_scaffold_1052_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18512..18922)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E686B
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
hypothetical protein
cn_combo_scaffold_1052_22
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19017..19829
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379FBB1
AraC family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
AraC family transcriptional regulator
cn_combo_scaffold_1052_23
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19928..21139
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036DCF7B
fosmidomycin resistance protein
Probable fosmidomycin resistance protein {ECO:0000313|EMBL:BAB49755.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="R
cn_combo_scaffold_1052_24
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21146..21904)
DNA (759bp) protein (253aa)
short-chain dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003685641
Short chain dehydrogenase {ECO:0000313|EMBL:EHH05492.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium a
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_1052_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22114..23367
DNA (1254bp) protein (418aa)
sarcosine oxidase subunit beta n=1 Tax=Hoeflea sp. 108 RepID=UPI0003628AC6
Sarcosine oxidase beta subunit family protein {ECO:0000313|EMBL:EHK57795.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sou
sarcosine oxidase subunit beta
cn_combo_scaffold_1052_26
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23376..23732
DNA (357bp) protein (119aa)
Cupin 2 protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D1P6_9RHIZ
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KJS15001.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c
mannose-6-phosphate isomerase
cn_combo_scaffold_1052_27
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23832..24266
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036481AC
Putative uncharacterized protein {ECO:0000313|EMBL:EHH03858.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
cn_combo_scaffold_1052_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24278..24658
DNA (381bp) protein (127aa)
sarcosine oxidase subunit delta n=1 Tax=Hoeflea sp. 108 RepID=UPI0003619768
Sarcosine oxidase subunit delta family protein {ECO:0000313|EMBL:EHK57796.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" so
sarcosine oxidase subunit delta
cn_combo_scaffold_1052_29
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24658..27651
DNA (2994bp) protein (998aa)
sarcosine oxidase subunit alpha n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A919B
sarcosine oxidase subunit alpha
Sarcosine oxidase, alpha subunit family protein {ECO:0000313|EMBL:ADV10970.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" so
cn_combo_scaffold_1052_30
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27644..28195
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037025FF
Sarcosine oxidase subunit gamma {ECO:0000313|EMBL:ESW89961.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
sarcosine oxidase, gamma subunit family, heterotetrameric form
Displaying items 1-30 of 46 in total

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