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cn_combo_scaffold_1463

Alias: MES20_29

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1463_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

606..1892
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003802B5D
Rare lipoprotein A {ECO:0000313|EMBL:EHK55234.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi C
rare lipoprotein A
cn_combo_scaffold_1463_2
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2016..3182
DNA (1167bp) protein (389aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:AEH88936.1}; EC=3.4.16.4 {ECO:0000313|EMBL:AEH88936.1};; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacter
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375D83C
cn_combo_scaffold_1463_3
Mesorhizobium sp. L103C565B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3282..3953
DNA (672bp) protein (224aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1287094 species="Bacteria; Proteobacteria; Alp
thymidylate kinase (EC:2.7.4.9)
thymidylate kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B4F75
cn_combo_scaffold_1463_4
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3953..5005
DNA (1053bp) protein (351aa)
DNA polymerase III subunit delta'''' n=1 Tax=Hoeflea sp. 108 RepID=UPI0003687D52
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:AID30015.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
DNA polymerase III subunit delta'
cn_combo_scaffold_1463_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5090..6631
DNA (1542bp) protein (514aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:
methionyl-tRNA synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036CEB0C
methionyl-tRNA synthetase
cn_combo_scaffold_1463_6
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6643..7425
DNA (783bp) protein (261aa)
LuxR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DBEDC
TatD family hydrolase
Hydrolase, TatD family {ECO:0000313|EMBL:ADV12908.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cicer
cn_combo_scaffold_1463_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7430..8272
DNA (843bp) protein (281aa)
PhnP n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003022B9F
Hydrolase {ECO:0000313|EMBL:EKF43694.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.
hydrolase
cn_combo_scaffold_1463_8
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8432..9256)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI00037EAB00
Asp/Glu racemase {ECO:0000313|EMBL:KJC43585.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP8
Asp/Glu racemase
cn_combo_scaffold_1463_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9720..10130)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B00BA
Uncharacterized protein {ECO:0000313|EMBL:KDP75919.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
hypothetical protein
cn_combo_scaffold_1463_10
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10490..10912)
DNA (423bp) protein (141aa)
UPI0003CEDE41 related cluster n=1 Tax=unknown RepID=UPI0003CEDE41
Uncharacterized protein {ECO:0000313|EMBL:CDX14621.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
putative redox protein, regulator of disulfide bond formation
cn_combo_scaffold_1463_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11054..11608)
DNA (555bp) protein (185aa)
single-stranded DNA-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037CE373
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1107882 species="Bacteria; Proteobacteria; Alp
single-strand binding protein
cn_combo_scaffold_1463_12
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11969..12610
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000366040B
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EJZ21809.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacter
glyoxalase/bleomycin resistance protein/dioxygenase
cn_combo_scaffold_1463_13
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12647..14131)
DNA (1485bp) protein (495aa)
dimethylaniline monooxygenase (EC:1.14.13.8)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DB25D
Uncharacterized protein {ECO:0000313|EMBL:EKF18006.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
cn_combo_scaffold_1463_14
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14301..14753)
DNA (453bp) protein (151aa)
cupin n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E4B8E
Uncharacterized protein {ECO:0000313|EMBL:EKF18007.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor
Cupin family protein
cn_combo_scaffold_1463_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14933..15928
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379125C
AraC family transcriptional regulator {ECO:0000313|EMBL:EKF18008.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Ni
transcriptional regulator, AraC family
cn_combo_scaffold_1463_16
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15956..16372)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036873E7
Uncharacterized protein {ECO:0000313|EMBL:KFL26721.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
cn_combo_scaffold_1463_17
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16375..17118)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F01E3
Uncharacterized protein {ECO:0000313|EMBL:KFL24982.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
putative racemase
cn_combo_scaffold_1463_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17931..20855
DNA (2925bp) protein (975aa)
excinuclease ABC subunit A n=1 Tax=Hoeflea sp. 108 RepID=UPI0003781954
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
uvrA; excinuclease ABC subunit A
cn_combo_scaffold_1463_19

Not on your lists

comp(20860..21246)
DNA (387bp) protein (129aa)
PilT protein domain protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RWA7_ALLVD
Uncharacterized protein {ECO:0000313|EMBL:KKO04693.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PilT protein domain protein
cn_combo_scaffold_1463_20

Not on your lists

comp(21243..21785)
DNA (543bp) protein (181aa)
Prevent-host-death family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F509_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKO04694.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
prevent-host-death family protein
cn_combo_scaffold_1463_21
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21833..22642
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FT66_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX82453.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_1463_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22705..23523)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000363B337
exopolysaccharide regulatory protein exoR
Exopolysaccharide regulatory protein ExoR {ECO:0000313|EMBL:BAB48549.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
cn_combo_scaffold_1463_23
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23510..23956)
DNA (447bp) protein (149aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
UPI0003CE7294 related cluster n=1 Tax=unknown RepID=UPI0003CE7294
dihydroxy-acid dehydratase
cn_combo_scaffold_1463_24
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24228..25424)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI000368DE31
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EHS49825.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizo
aromatic hydrocarbon degradation membrane protein
cn_combo_scaffold_1463_25
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25793..28576)
DNA (2784bp) protein (928aa)
Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004}; EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};; Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004}; Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02
valS; valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B5274
cn_combo_scaffold_1463_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28717..29421)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000360502B
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54900.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
cn_combo_scaffold_1463_27
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29671..31047)
DNA (1377bp) protein (459aa)
transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000378FD2C
Transporter {ECO:0000313|EMBL:ESX74217.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.
type I secretion outer membrane protein, TolC family
cn_combo_scaffold_1463_28
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31211..31933)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EB60E
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:EHK56877.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizob
protein-L-isoaspartate O-methyltransferase
cn_combo_scaffold_1463_29
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32321..35278
DNA (2958bp) protein (986aa)
Autotransporter n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6T0R8_JANMA
autotransporter rbh
Autotransporter {ECO:0000313|EMBL:ABR90533.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp.
Displaying 29 items

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