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cn_combo_scaffold_2121

Alias: MES20_54

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2121_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23..1192
DNA (1170bp) protein (390aa)
FAD-dependent oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036186A2
FAD-dependent oxidoreductase domain-containing protein 1 {ECO:0000313|EMBL:CCV10561.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizo
hypothetical protein
cn_combo_scaffold_2121_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1230..1727)
DNA (498bp) protein (166aa)
Putative kinase n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VXX3_RHILT
Putative kinase {ECO:0000313|EMBL:EJC78226.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizo
kinase
cn_combo_scaffold_2121_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2438..2956
DNA (519bp) protein (173aa)
UPI0003CFC9C3 related cluster n=1 Tax=unknown RepID=UPI0003CFC9C3
Uncharacterized protein {ECO:0000313|EMBL:ESZ18947.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_2121_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2984..4219
DNA (1236bp) protein (412aa)
UPI0003D0498D related cluster n=1 Tax=unknown RepID=UPI0003D0498D
Hemolysin D {ECO:0000313|EMBL:ESZ18948.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.
putative transmembrane protein,HlyD-family
cn_combo_scaffold_2121_5
unknown

Not on your lists

comp(4403..4642)
DNA (240bp) protein (80aa)

This feature has no annotations

cn_combo_scaffold_2121_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4815..6785
DNA (1971bp) protein (657aa)
Putative adenylate cyclase {ECO:0000313|EMBL:CDX21785.1}; EC=4.6.1.1 {ECO:0000313|EMBL:CDX21785.1};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriace
Putative integral membrane protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4ILL4_RHIML
putative integral membrane protein
cn_combo_scaffold_2121_7
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6915..7712
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F4C7D
Membrane protein {ECO:0000313|EMBL:KGF69647.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
cn_combo_scaffold_2121_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7757..7978)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAG1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11275.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
cn_combo_scaffold_2121_9
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8137..10167
DNA (2031bp) protein (677aa)
Adenylate cyclase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YAG0_9RHIZ
Adenylate cyclase {ECO:0000313|EMBL:EHH11274.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae
transcriptional activator domain-containing protein rbh
cn_combo_scaffold_2121_10
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10352..11791
DNA (1440bp) protein (480aa)
FAD-linked oxidase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D3E7C
FAD linked oxidase-like protein rbh
FAD linked oxidase-like protein {ECO:0000313|EMBL:ABG63843.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativor
cn_combo_scaffold_2121_11
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11931..12272
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003735627
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKB06886.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geo
ArsR family transcriptional regulator
cn_combo_scaffold_2121_12
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12295..12783
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003604A48
Activator of Hsp90 ATPase homolog 1-like family protein {ECO:0000313|EMBL:AID34174.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobi
hypothetical protein
cn_combo_scaffold_2121_13
unknown

Not on your lists

comp(12803..13123)
DNA (321bp) protein (107aa)

This feature has no annotations

cn_combo_scaffold_2121_14
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13388..13831
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037AA483
Uncharacterized protein {ECO:0000313|EMBL:EMG53060.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
hypothetical protein
cn_combo_scaffold_2121_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13899..14714)
DNA (816bp) protein (272aa)
ABC transporter related protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M34_MESSB
ABC-type Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:CDP53928.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosi
ABC transporter rbh
cn_combo_scaffold_2121_16
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14707..15756)
DNA (1050bp) protein (350aa)
Transport system permease protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M35_MESSB
Iron ABC transporter permease {ECO:0000313|EMBL:KFL28647.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E
transport system permease
cn_combo_scaffold_2121_17
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15753..16775)
DNA (1023bp) protein (341aa)
Transport system permease protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFG5_PELHB
ABC transporter permease {ECO:0000313|EMBL:KKB11943.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
transport system permease
cn_combo_scaffold_2121_18
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16865..17779
DNA (915bp) protein (305aa)
Periplasmic binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M37_MESSB
Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB {ECO:0000313|EMBL:CDP53924.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicro
periplasmic binding protein rbh
cn_combo_scaffold_2121_19
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17909..18514
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
isopropylmalate isomerase n=1 Tax=Hoeflea sp. 108 RepID=UPI00038116FE
cn_combo_scaffold_2121_20
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18726..19553
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F8C6B
Uncharacterized protein {ECO:0000313|EMBL:ESY64654.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_2121_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19564..19944
DNA (381bp) protein (127aa)
endoribonuclease L-PSP n=1 Tax=Hoeflea sp. 108 RepID=UPI00037591E3
Uncharacterized protein {ECO:0000313|EMBL:CDX40489.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
endoribonuclease L-PSP
cn_combo_scaffold_2121_22
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19961..20764
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003637B7F
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:CDN90960.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
putative endonuclease/exonuclease/phosphatase
cn_combo_scaffold_2121_23
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20841..21755)
DNA (915bp) protein (305aa)
Peptidase M23B n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IN26_XANP2
peptidase M23B rbh
Peptidase M23B {ECO:0000313|EMBL:ABS69419.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacte
cn_combo_scaffold_2121_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22251..23354
DNA (1104bp) protein (368aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036743E2
cn_combo_scaffold_2121_25
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23423..24190)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000366AC08
Uncharacterized protein {ECO:0000313|EMBL:CCV10571.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_2121_26
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24485..25876
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A8836
ABC transporter
ABC transporter-like protein {ECO:0000313|EMBL:EHH13753.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
Displaying 26 items

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