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cn_combo_scaffold_2465

Alias: MES20_65

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2465_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)
Transcriptional regulator {ECO:0000313|EMBL:KGM32464.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus lim
cn_combo_scaffold_2465_2
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153..1976)
DNA (1824bp) protein (608aa)
6-phosphogluconate dehydratase (EC:4.2.1.12)
phosphogluconate dehydratase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D565C
Phosphogluconate dehydratase {ECO:0000313|EMBL:ESZ30394.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
cn_combo_scaffold_2465_3
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2127..2825)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000377DC92
6-phosphogluconolactonase {ECO:0000313|EMBL:EHH10983.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium a
6-phosphogluconolactonase
cn_combo_scaffold_2465_4
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2830..4299)
DNA (1470bp) protein (490aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
glucose 6-phosphate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003691F1B
cn_combo_scaffold_2465_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4469..5314
DNA (846bp) protein (282aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EHH10985.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EHH10985.1};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
3-ketoacyl-ACP reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A34CD
short-chain dehydrogenase/reductase SDR
cn_combo_scaffold_2465_6
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5424..6548
DNA (1125bp) protein (375aa)
fabH-1; 3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41)
3-oxoacyl-ACP synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00038104EA
3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:EJN05448.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" s
cn_combo_scaffold_2465_7
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6668..6979)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000381B133
protein of unassigned function
Uncharacterized protein {ECO:0000313|EMBL:EMS39860.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
cn_combo_scaffold_2465_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7150..7968)
DNA (819bp) protein (273aa)
putrescine/spermidine ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E9653
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHK54428.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriacea
ABC transporter polyamine transport protein, permease
cn_combo_scaffold_2465_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7970..8881)
DNA (912bp) protein (304aa)
putrescine/spermidine ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BB92C
Putrescine transporter subunit: membrane component of ABC superfamily {ECO:0000313|EMBL:CDX16268.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
ABC transporter polyamine transport protein, permease
cn_combo_scaffold_2465_10
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8890..10029)
DNA (1140bp) protein (380aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phylloba
ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000374CBEC
spermidine/putrescine ABC transporter ATPase
cn_combo_scaffold_2465_11
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10101..11195)
DNA (1095bp) protein (365aa)
putrescine/spermidine ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BB85D
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
family 1 extracellular solute-binding protein
cn_combo_scaffold_2465_12
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11431..12390)
DNA (960bp) protein (320aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A4CC2
Membrane protein {ECO:0000313|EMBL:ESX77683.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC42
hypothetical protein
cn_combo_scaffold_2465_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12716..14767
DNA (2052bp) protein (684aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037647B7
Diguanylate cyclase {ECO:0000313|EMBL:KDR87795.1}; TaxID=1315272 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agroba
Putative diguanylate cyclase signaling protein (with GGDEF, EAL and MHYT domains)
cn_combo_scaffold_2465_14
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14771..16213)
DNA (1443bp) protein (481aa)
Cro/Cl family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A9564
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADV11563.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice
cn_combo_scaffold_2465_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16459..17748
DNA (1290bp) protein (430aa)
Isocitrate lyase {ECO:0000313|EMBL:CDX61002.1}; EC=4.1.3.1 {ECO:0000313|EMBL:CDX61002.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhiz
isocitrate lyase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003759F22
aceA; Isocitrate lyase
cn_combo_scaffold_2465_16
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17846..18088
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368C25D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV11561.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium cice
cn_combo_scaffold_2465_17
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18299..18754
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364A83D
Transcriptional regulator {ECO:0000313|EMBL:ESY73798.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
two-component system, regulatory protein
cn_combo_scaffold_2465_18
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18755..19465)
DNA (711bp) protein (237aa)
HAD hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A1555
Haloacid dehalogenase {ECO:0000313|EMBL:EHH10989.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorp
hypothetical protein
cn_combo_scaffold_2465_19
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19606..21039
DNA (1434bp) protein (478aa)
glutamine synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F3C57
Glutamine synthetase {ECO:0000313|EMBL:ESX77691.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LS
glutamine synthetase
cn_combo_scaffold_2465_20
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21078..21461
DNA (384bp) protein (128aa)
S23 ribosomal protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KLL0_MESAW
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:AGB44864.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium austra
cn_combo_scaffold_2465_21
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21536..22384
DNA (849bp) protein (283aa)
oxidoreductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C75ED
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:BAB52798.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF
Displaying 21 items

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