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cn_combo_scaffold_2989

Alias: MES20_73

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2989_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83..2893)
DNA (2811bp) protein (937aa)
UPI0003D032E6 related cluster n=1 Tax=unknown RepID=UPI0003D032E6
DNA helicase {ECO:0000313|EMBL:ESZ06401.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00
putative DNA helicase-like protein
cn_combo_scaffold_2989_2
unknown

Not on your lists

comp(3289..3474)
DNA (186bp) protein (62aa)

This feature has no annotations

cn_combo_scaffold_2989_3
unknown

Not on your lists

3659..3874
DNA (216bp) protein (72aa)

This feature has no annotations

cn_combo_scaffold_2989_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4060..5142
DNA (1083bp) protein (361aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=395491 species="Bacter
GDP-mannose 4,6-dehydratase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B1M9_RHILS
GDP-mannose 4,6-dehydratase rbh
cn_combo_scaffold_2989_5
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5147..6100
DNA (954bp) protein (318aa)
nolK; GDP-L-fucose synthase (EC:1.1.1.271) rbh
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxI
GDP-L-fucose synthase n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2KC59_RHIEC
cn_combo_scaffold_2989_trna_1
unknown

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comp(6226..6299)
DNA (74bp)
transferRNA
cn_combo_scaffold_2989_6
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6393..7556)
DNA (1164bp) protein (388aa)
amidohydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037000D2
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:ESY96657.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A
cn_combo_scaffold_2989_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7695..8927
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003635533
Penicillin-binding protein {ECO:0000313|EMBL:CDX23865.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pl
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
cn_combo_scaffold_2989_8
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8924..10033
DNA (1110bp) protein (370aa)
ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375F314
ATP-binding protein {ECO:0000313|EMBL:ESZ26797.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C
cobalamin synthesis protein P47K
cn_combo_scaffold_2989_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10316..10549)
DNA (234bp) protein (78aa)
UPI0003CFFB16 related cluster n=1 Tax=unknown RepID=UPI0003CFFB16
Response regulator SirA {ECO:0000313|EMBL:ESZ21976.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_2989_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10555..11811)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037CE137
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:CDX23240.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
ErfK/YbiS/YcfS/YnhG family protein
cn_combo_scaffold_2989_11
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12035..12985)
DNA (951bp) protein (317aa)
acetyl-CoA carboxylase subunit alpha n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C50D5
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
cn_combo_scaffold_2989_12
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13083..14000)
DNA (918bp) protein (306aa)
tyrosine recombinase XerD n=1 Tax=Hoeflea sp. 108 RepID=UPI00037174B1
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
tyrosine recombinase XerD
cn_combo_scaffold_2989_13
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13997..14146)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIY6_MESAW
hypothetical protein
Signal peptide protein {ECO:0000313|EMBL:ESY97936.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
cn_combo_scaffold_2989_14
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14289..14906
DNA (618bp) protein (206aa)
Shikimate kinase {ECO:0000255|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000255|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000255|HAMAP-Rule:MF_00109};; TaxID=266835 species="Bacteria; Proteobacteria; Alphapr
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EBD94
shikimate kinase
cn_combo_scaffold_2989_15
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14903..16018
DNA (1116bp) protein (372aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1287321 species="Bacteri
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037528E5
cn_combo_scaffold_2989_16
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16015..16935
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CD303
Uncharacterized protein {ECO:0000313|EMBL:ESY75263.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_2989_17
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16945..17469)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F0ED7
ArsR family transcriptional regulator {ECO:0000313|EMBL:KIC53728.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Br
protein-tyrosine-phosphatase
cn_combo_scaffold_2989_18
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17528..17830)
DNA (303bp) protein (101aa)
BolA family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000379BCEE
BolA family transcriptional regulator {ECO:0000313|EMBL:ESX68220.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
transcriptional regulator BolA
cn_combo_scaffold_2989_19
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17975..18586
DNA (612bp) protein (204aa)
molecular chaperone DnaJ n=1 Tax=Hoeflea sp. 108 RepID=UPI0003765427
Uncharacterized 19.0 kDa protein in cobS 5'region {ECO:0000313|EMBL:CDX38240.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
cn_combo_scaffold_2989_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18702..18914
DNA (213bp) protein (71aa)
Aerobic cobaltochelatase cobS subunit (Cobalamin biosynthesis) {ECO:0000313|EMBL:CDX42617.1}; EC=6.6.1.2 {ECO:0000313|EMBL:CDX42617.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacte
cobalt chelatase, pCobS small subunit (EC:6.6.1.2)
Cobalt chelatase, pCobS small subunit n=2 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y1Z1_MESOW
Displaying 21 items

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