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cn_combo_scaffold_9786

Alias: MES20_136

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_9786_1
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2..427
DNA (426bp) protein (142aa)
30S ribosomal protein S3 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E4139
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
rpsC; 30S ribosomal protein S3
cn_combo_scaffold_9786_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


452..865
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036124DA
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorh
cn_combo_scaffold_9786_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


879..1079
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A4EE8
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
50S ribosomal protein L29
cn_combo_scaffold_9786_4
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1091..1330
DNA (240bp) protein (80aa)
30S ribosomal protein S17 n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D9C76
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
30S ribosomal protein S17
cn_combo_scaffold_9786_5
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1399..1767
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=15 Tax=Mesorhizobium RepID=RL14_RHILO
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
cn_combo_scaffold_9786_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1780..2094
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Hoeflea sp. 108 RepID=UPI000366F06C
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
50S ribosomal protein L24
cn_combo_scaffold_9786_7
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2087..2644
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003679E26
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
cn_combo_scaffold_9786_8
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2672..2977
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037141AF
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
rpsN; 30S ribosomal protein S14
cn_combo_scaffold_9786_9
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2990..3388
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003626DD0
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
30S ribosomal protein S8
cn_combo_scaffold_9786_10
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3424..3957
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D5A98
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhi
cn_combo_scaffold_9786_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4045..4404
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003650A55
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
50S ribosomal protein L18
cn_combo_scaffold_9786_12
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4534..5109
DNA (576bp) protein (192aa)
30S ribosomal protein S5 n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EFACF
30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorh
cn_combo_scaffold_9786_13
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5134..5331
DNA (198bp) protein (66aa)
50S ribosomal protein L30 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EFA8E
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
50S ribosomal protein L30
cn_combo_scaffold_9786_14
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5353..5826
DNA (474bp) protein (158aa)
50S ribosomal protein L15 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003733C33
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
cn_combo_scaffold_9786_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5958..6476
DNA (519bp) protein (173aa)
preprotein translocase subunit SecY n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BCA1D
Suspect SCG annotation. See neighboring gene [cn_combo_scaffold_9786_16].
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
preprotein translocase subunit SecY
cn_combo_scaffold_9786_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6467..7300
DNA (834bp) protein (278aa)
preprotein translocase subunit SecY n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BCA1D
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
preprotein translocase subunit SecY
cn_combo_scaffold_9786_17
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7297..7890
DNA (594bp) protein (198aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
UPI0003CED726 related cluster n=1 Tax=unknown RepID=UPI0003CED726
cn_combo_scaffold_9786_18
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8075..8224
DNA (150bp) protein (50aa)
30S ribosomal protein S13 n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EB225
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
Displaying 18 items

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