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cn_combo_scaffold_426_12

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(10432..11271)

Top 3 Functional Annotations

Value Algorithm Source
amino acid ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003736725 similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 273.0
  • Bit_score: 462
  • Evalue 4.30e-127
Amino acid ABC transporter {ECO:0000313|EMBL:ESW84019.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 269.0
  • Bit_score: 423
  • Evalue 2.40e-115
family 3 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 276.0
  • Bit_score: 415
  • Evalue 1.30e-113

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGAAACTGGGGCCGCTTACGCTCGCAATCGCCATGTCGCTGGCTGCCTTGTCCGCGCCCGCCACGGCCCAGCCGCAGGTGCCGGTGCTCTGGGACGTGAAGGAGCGCCTGCCGAAGCCTGACCTCTCCGCCCTGCCGCGGCTTCGCTTCCTGACGACCACCGATTTCCCGCCGTTCAACTTCATCGACAAGAACGGCCGGCTGTCCGGTTTTCACGTCGATCTGGCGCGAGCCATCTGTGCCGAACTCGGCGTCCCGGAGAAATGCCAGATCCAGGCGCTGCCCTGGGCCGAGCTAGACGCGGCCCTCAACGCCGGCGATGGCGAGGCGCTGATCGCAGGGGTGCCAGCGACGGCCGAGAACCGCGAGAAATACGCATTCTCACGGTCCTATCTGCAGTTTCCGGCCCGCTTCATCATGAAGAAGGCACAAGCCGTCACCGAGCCCGTGGTCGACAAGCTCCAGGGCAAACGCGTGGGGGTCATGGCCGGGTCCGCCCACGAGCGTGTGTTGCGCGACTATTTCGGCGGAGTTCAGGTCGTCACCTACACGAAGCCGGAATGGCTGTACGGCGATCTCAAGGACGGCAAGACCGATGCCGTGTTCGGTGACGGCATGCGCCAGTCGTTCTGGCTTGCCGGCACGGACGCCGCCGCCTGCTGCCGCTTTGCCGGCGGGCCTTATCTGGCGCCGGAATATCTCGGCACTGGCCTCGCGATCGCCGCCAAGCCCGGCGAGCCCGATCTCGCGGCCGCCTTCGACTACGCCCTGCACGAGATATCGGCGAAGGGTATCTTCGCCGAACTCTATCTGCGCTATTTCCCGGTGAGCTTCTACTAA
PROTEIN sequence
Length: 280
MKLGPLTLAIAMSLAALSAPATAQPQVPVLWDVKERLPKPDLSALPRLRFLTTTDFPPFNFIDKNGRLSGFHVDLARAICAELGVPEKCQIQALPWAELDAALNAGDGEALIAGVPATAENREKYAFSRSYLQFPARFIMKKAQAVTEPVVDKLQGKRVGVMAGSAHERVLRDYFGGVQVVTYTKPEWLYGDLKDGKTDAVFGDGMRQSFWLAGTDAAACCRFAGGPYLAPEYLGTGLAIAAKPGEPDLAAAFDYALHEISAKGIFAELYLRYFPVSFY*