ggKbase home page

cn_combo_scaffold_426

Alias: MES20_1

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_426_1
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..333
DNA (333bp) protein (111aa)
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003773C16
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EXL09166.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluv
acyl-CoA dehydrogenase
cn_combo_scaffold_426_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

464..1570
DNA (1107bp) protein (369aa)
acyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037614B0
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAB52038.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (str
cn_combo_scaffold_426_3
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1602..2810
DNA (1209bp) protein (403aa)
Putative acyl-CoA thiolase {ECO:0000313|EMBL:CDX36551.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CDX36551.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriacea
acetyl-CoA acetyltransferase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A671C
cn_combo_scaffold_426_4
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2814..3398
DNA (585bp) protein (195aa)
isochorismatase n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003818E9F
Isochorismatase {ECO:0000313|EMBL:KJC54899.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP84
isochorismatase family protein
cn_combo_scaffold_426_5
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3410..5629
DNA (2220bp) protein (740aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B16B8
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:AID27876.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" sourc
3-hydroxyacyl-CoA dehydrogenase
cn_combo_scaffold_426_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5636..6184
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035CF43A
hypothetical protein
Mlr5630 protein {ECO:0000313|EMBL:BAB52041.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAF
cn_combo_scaffold_426_7
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6297..6944
DNA (648bp) protein (216aa)
DNA-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C3869
putative transcriptional regulator
DNA-binding protein {ECO:0000313|EMBL:ESY92549.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNH
cn_combo_scaffold_426_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6948..7739
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DE698
Uncharacterized protein {ECO:0000313|EMBL:AID27879.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huak
hypothetical protein
cn_combo_scaffold_426_9
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7741..8208)
DNA (468bp) protein (156aa)
Putative acetyltransferase {ECO:0000313|EMBL:BAJ27245.1}; EC=2.3.1.- {ECO:0000313|EMBL:BAJ27245.1};; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BB216
putative acetyltransferase
cn_combo_scaffold_426_10
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8210..9847)
DNA (1638bp) protein (546aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=653930 species="Bacteria; Proteobac
lysyl-tRNA synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003829A34
lysyl-tRNA synthetase, archaeal and spirochete
cn_combo_scaffold_426_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10016..10429
DNA (414bp) protein (138aa)
Tellurite resistance protein TerB n=1 Tax=Hoeflea sp. 108 RepID=UPI00036DDD87
Putative uncharacterized protein {ECO:0000313|EMBL:EHK52342.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
cn_combo_scaffold_426_12
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10432..11271)
DNA (840bp) protein (280aa)
amino acid ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI0003736725
Amino acid ABC transporter {ECO:0000313|EMBL:ESW84019.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
family 3 extracellular solute-binding protein
cn_combo_scaffold_426_13
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11780..13549
DNA (1770bp) protein (590aa)
Glycosyl transferase family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MDB1_9RHIZ
Glycosyl transferase family protein {ECO:0000313|EMBL:EKF20146.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitr
glycosyl transferase family protein
cn_combo_scaffold_426_14
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13746..15023
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BD6F7
histidine kinase
cn_combo_scaffold_426_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15138..15863
DNA (726bp) protein (242aa)
PhoU family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F8F8C
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesor
phosphate uptake regulator PhoU
cn_combo_scaffold_426_16
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15951..16964
DNA (1014bp) protein (338aa)
magnesium transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000377DE3B
Metal-transport protein {ECO:0000313|EMBL:CCV14728.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Mg2 transporter protein CorA family protein
cn_combo_scaffold_426_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17041..17559)
DNA (519bp) protein (173aa)
GcrA cell cycle regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E5117
GcrA cell cycle regulator {ECO:0000313|EMBL:CDX50948.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plu
GcrA cell cycle regulator
cn_combo_scaffold_426_18
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17912..19105
DNA (1194bp) protein (398aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=763057 species="Bacteria; Prot
argD; acetylornithine transaminase (EC:2.6.1.11 2.6.1.17)
acetylornithine aminotransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI000379AC06
cn_combo_scaffold_426_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19121..20038
DNA (918bp) protein (306aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HPQ3_9RHIZ
cn_combo_scaffold_426_20
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20159..21148
DNA (990bp) protein (330aa)
molecular chaperone Hsp33 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E4C2E
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSH
hslO; heat shock protein 33
cn_combo_scaffold_426_21
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21155..21547)
DNA (393bp) protein (131aa)
magnesium transporter ApaG n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FE6C7
ApaG domain-containing protein
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" s
cn_combo_scaffold_426_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21737..22669
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YKN6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGM34470.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limos
hypothetical protein
cn_combo_scaffold_426_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22730..23923)
DNA (1194bp) protein (398aa)
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:CDX36501.1}; EC=2.5.1.- {ECO:0000313|EMBL:CDX36501.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobact
O-succinylhomoserine sulfhydrylase (EC:2.5.1.-)
O-succinylhomoserine sulfhydrylase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035DEA7E
cn_combo_scaffold_426_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24193..25281
DNA (1089bp) protein (363aa)
2'-deoxycytidine 5'-triphosphate deaminase {ECO:0000313|EMBL:EHK57294.1}; EC=3.5.4.13 {ECO:0000313|EMBL:EHK57294.1};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
2''''-deoxycytidine 5''''-triphosphate deaminase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003635924
2-deoxycytidine 5-triphosphate deaminase
cn_combo_scaffold_426_25
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25387..26169
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000362A8C1
Amino acid ABC transporter {ECO:0000313|EMBL:EXL08651.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium de
amino acid ABC transporter substrate-binding protein
cn_combo_scaffold_426_26
Hoeflea sp. 108, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26291..26488
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003614604
cn_combo_scaffold_426_trna_3
unknown

Not on your lists

comp(27042..27112)
DNA (71bp)
transferRNA
cn_combo_scaffold_426_27
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27350..27613
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375BD7E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV14971.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
cn_combo_scaffold_426_28
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27616..28512)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037CB18B
Histone deacetylase
Histone deacetylase {ECO:0000313|EMBL:AEH90935.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportun
cn_combo_scaffold_426_29
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28632..29990
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037CA0E4
MATE efflux family protein {ECO:0000313|EMBL:AID27918.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium h
DNA-damage-inducible protein
Displaying items 1-30 of 90 in total

View Taxonomy