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cn_combo_scaffold_426_35

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 36481..36900

Top 3 Functional Annotations

Value Algorithm Source
large conductance mechanosensitive channel protein MscL n=1 Tax=Hoeflea sp. 108 RepID=UPI0003780337 similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 140.0
  • Bit_score: 245
  • Evalue 4.10e-62
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phylloba similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 139.0
  • Bit_score: 228
  • Evalue 7.30e-57
large conductance mechanosensitive channel protein similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 140.0
  • Bit_score: 211
  • Evalue 1.90e-52

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGCTAAAGGAATTCCAGGAGTTCATCTCCAAGGGCAATGTGATGGACCTTGCCGTCGGTGTGATCATCGGCGGTGCTTTCGGACTTATCGTGTCGTCCCTGGTCGGCGACATCATCATGCCGATCGTCGGCGCCATCTTCGGCGGCTTCGATTTCTCCAACTATTTCCTGCCGCTGTCGTCGTCTGTCACCGCGGTGACCCTGGAAGAGGCGAAGAAGCAGGGGGCAGTGTTCGCCTACGGCAAGTTCTTCACCGTTGTCATCAACTTCCTGATCCTCGCCTGGATCATCTTCCTGATGGTCAAGGGCGTGAACACCATGCGCAAGAAGCTGGAAAAGGAAAAGGCGGCCGAACCAACTCCGCCCGCGGCCGACGTGGTTCTGCTCACCGAGATCCGCGATCTTCTGGCCAAGAAGTAA
PROTEIN sequence
Length: 140
MLKEFQEFISKGNVMDLAVGVIIGGAFGLIVSSLVGDIIMPIVGAIFGGFDFSNYFLPLSSSVTAVTLEEAKKQGAVFAYGKFFTVVINFLILAWIIFLMVKGVNTMRKKLEKEKAAEPTPPAADVVLLTEIRDLLAKK*