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cn_combo_scaffold_513_18

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 16922..17191

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Hoeflea sp. 108 RepID=UPI000377CCC2 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 89.0
  • Bit_score: 174
  • Evalue 4.40e-41
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 89.0
  • Bit_score: 179
  • Evalue 1.90e-42
rpmA; 50S ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 89.0
  • Bit_score: 165
  • Evalue 5.70e-39

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Taxonomy

Aquamicrobium defluvii → Aquamicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGGCACATAAGAAAGCTGGCGGTTCGTCGCGCAACGGTCGCGATTCTGAGTCGAAGCGCCTTGGCGTCAAGAAGTTCGGCAGCGAAGCCGTGATTCCGGGCAACATTATCGTTCGTCAACGCGGCACGCAGTGGCATCCCGGCGTCAACGTCGGCATGGGCAAGGACCATACCCTTTTTGCTCTTGAAGCCGGTGCAGTGTCGTTTGCCAAGAAAGCCAACGGCCGAACCTACGTATCGGTAAACCCGATGCCGAAGGCCGCGGAGTAG
PROTEIN sequence
Length: 90
MAHKKAGGSSRNGRDSESKRLGVKKFGSEAVIPGNIIVRQRGTQWHPGVNVGMGKDHTLFALEAGAVSFAKKANGRTYVSVNPMPKAAE*