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cn_combo_scaffold_513

Alias: MES20_3

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Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_513_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

cn_combo_scaffold_513_2
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77..1606
DNA (1530bp) protein (510aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
F0F1 ATP synthase subunit alpha n=1 Tax=Hoeflea sp. 108 RepID=UPI0003645DD2
ATP synthase F1 subunit alpha
cn_combo_scaffold_513_3
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1623..2507
DNA (885bp) protein (295aa)
F0F1 ATP synthase subunit gamma n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F8AB1
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1297
ATP synthase F1 subunit gamma
cn_combo_scaffold_513_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2568..4109
DNA (1542bp) protein (514aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.34)
F0F1 ATP synthase subunit beta n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031D1AEA
cn_combo_scaffold_513_5
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4217..4615
DNA (399bp) protein (133aa)
atpC; ATP synthase F0F1 subunit epsilon (EC:3.6.3.14)
F0F1 ATP synthase subunit epsilon n=1 Tax=Hoeflea sp. 108 RepID=UPI0003702FE8
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
cn_combo_scaffold_513_6
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4689..5804)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003662143
L-carnitine dehydratase/bile acid-inducible protein F
CaiB protein {ECO:0000313|EMBL:BAQ49083.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticu
cn_combo_scaffold_513_7
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5892..6359)
DNA (468bp) protein (156aa)
CMP/dCMP deaminase (EC:3.5.4.3)
CMP/dCMP deaminase {ECO:0000313|EMBL:ABF10594.1}; EC=3.5.4.3 {ECO:0000313|EMBL:ABF10594.1};; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupr
CMP/dCMP deaminase n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LGY2_RALME
cn_combo_scaffold_513_8
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6372..6965)
DNA (594bp) protein (198aa)
Ankyrin n=2 Tax=Sinorhizobium medicae RepID=A6UFF4_SINMW
Ankyrin {ECO:0000313|EMBL:CDP51203.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ankyrin
cn_combo_scaffold_513_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7244..8119
DNA (876bp) protein (292aa)
Transcriptional regulator n=1 Tax=Pseudomonas aeruginosa BL13 RepID=U9HL30_PSEAI
LysR family transcriptional regulator {ECO:0000313|EMBL:KDP73955.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensife
transcriptional regulator
cn_combo_scaffold_513_10
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8297..9178
DNA (882bp) protein (294aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiale
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985S6_RHILO
glucose-1-phosphate thymidylyltransferase
cn_combo_scaffold_513_11
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9171..9734
DNA (564bp) protein (188aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABR63606.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ABR63606.1};; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria;
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000381601D
cn_combo_scaffold_513_12
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9731..10810
DNA (1080bp) protein (360aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellace
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003729848
dTDP-glucose 4,6-dehydratase
cn_combo_scaffold_513_13
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10807..11706
DNA (900bp) protein (300aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ABG64140.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ABG64140.1};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobac
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003643D77
dTDP-4-dehydrorhamnose reductase
cn_combo_scaffold_513_14
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11789..12634
DNA (846bp) protein (282aa)
Glycosyl transferase family 2 n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GKK6_RUEST
Glycosyl transferase {ECO:0000313|EMBL:KIC49954.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-
glycosyl transferase family protein
cn_combo_scaffold_513_15
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12770..15256
DNA (2487bp) protein (829aa)
Glycosyltransferase n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LEI5_AGRSH
glycosyltransferase rbh
Glycosyltransferase {ECO:0000313|EMBL:ADY65989.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" sourc
cn_combo_scaffold_513_16
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15516..15755
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MEL3_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP25854.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source
cn_combo_scaffold_513_trna_1
unknown

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comp(15882..15968)
DNA (87bp)
transferRNA
cn_combo_scaffold_513_17
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16465..16896
DNA (432bp) protein (144aa)
50S ribosomal protein L21 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003681E8A
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitrat
rplU; 50S ribosomal protein L21
cn_combo_scaffold_513_18
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16922..17191
DNA (270bp) protein (90aa)
50S ribosomal protein L27 n=1 Tax=Hoeflea sp. 108 RepID=UPI000377CCC2
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium
rpmA; 50S ribosomal protein L27
cn_combo_scaffold_513_19
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17310..17897
DNA (588bp) protein (196aa)
N-acetyltransferase GCN5 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D6546
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ESY73961.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp
acetyltransferase
cn_combo_scaffold_513_20
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17907..18767)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000374EC06
Endonuclease {ECO:0000313|EMBL:EZQ14498.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Metal-dependent hydrolase
cn_combo_scaffold_513_21
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18887..19924
DNA (1038bp) protein (346aa)
GTPase CgtA n=1 Tax=Hoeflea sp. 108 RepID=UPI0003740B02
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacter
GTP-binding protein Obg/CgtA
cn_combo_scaffold_513_22
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19935..21083
DNA (1149bp) protein (383aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
glutamate 5-kinase n=1 Tax=Hoeflea sp. 108 RepID=UPI000376671E
glutamate 5-kinase
cn_combo_scaffold_513_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21089..22369
DNA (1281bp) protein (427aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
gamma-glutamyl phosphate reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FD4B0
cn_combo_scaffold_513_24
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22576..23214
DNA (639bp) protein (213aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nicotinic acid mononucleotide adenylyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BC28F
nicotinate/nicotinamide nucleotide adenylyltransferase
cn_combo_scaffold_513_25
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23215..24045)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A5A05
Uncharacterized protein {ECO:0000313|EMBL:ETA72441.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti
transcriptional regulator
cn_combo_scaffold_513_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24275..25507
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E9BB3
Major facilitator superfamily protein {ECO:0000313|EMBL:EHK58304.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
major facilitator superfamily protein
cn_combo_scaffold_513_27
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25821..26060
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379C2C2
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
iojap-like ribosome-associated protein
cn_combo_scaffold_513_28
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26078..26560
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D5F49
hypothetical protein
cn_combo_scaffold_513_29
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26681..28000
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003715AA0
Filament-A {ECO:0000313|EMBL:EHK58307.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-
peptidase M23
Displaying items 1-30 of 77 in total

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