ggKbase home page

cn_combo_scaffold_513_54

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(52835..53728)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI000375FDC1 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 297.0
  • Bit_score: 464
  • Evalue 9.20e-128
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 297.0
  • Bit_score: 460
  • Evalue 2.90e-127
LysR family transcriptional regulator {ECO:0000313|EMBL:ESW81021.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 295.0
  • Bit_score: 460
  • Evalue 1.40e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGACTGACACTGATTGGAATCTGATCCGGAGTTTCGTGGCGGTGGCAGAGGCCGGAAGTCTGTCCGAAGCTGCGCGCCGATTATCGGCCAGCCAACCAACGCTCGGACGCCACATCGGTGAACTCGAGCAGGCCCTCGGCGTGACGCTCTTCCGACGAGGGCGCCAGGGCTACGCGCTTACCGAAGCGGGAAGCCTGCTCTATGAGCGGGGCAAGGTCGTAAGCGAGGAGGCCGCCGCCTTCTCGCGGCTGGCGCTCGGGTCGGTGGAAGCGATCGAAGGCACGGTGAGGATCGCGGCGAGCGAGATCGTCGCGGCCTATGTGTTGCCGCCGATGCTTGCGCGGCTCGGCCAGGAAGAGCCCGGCATAGAGTTCGAAATCGTCGCCTCGAACCGGGTCGAGAACCTTCTTCGTCGCGACGCCGACATTGCGATCCGCATGGTGCAACCGGCGCAGAACGAACTGGTAGCCCGAAAGGTCACGGAGATCCCGTTGCGGACCTGCGCGGCTGTCGGCTATCTCGACCGCCGCGGCCGCCCTTCGGTGGCGTCAGACCTGCTCTCCCACGACCTGATCGGCTTCGACCGCAGCGACGAGATGGTGCGTGGCTTCGCGCGCTTCCTGCCCAGCATCGGGCGCAGTGCGTTCCGGCTGCGCAGCGACAACCATGCGCTGCTTTGGGAGGCGGTTCGTTCAGGCAACGGCATCGGCATAGGCCAGGCGCCCCTCATCGCTCGCGACCCGATCGTCGAGGCTGTCCTCCCCGAGCTGCCGCTTCCGGTGCTGCCGGTCTGGCTGGCGATGCACCGCGACGTGCGCACCAGCGTCCGCATCCGCCGCGTCGCGGACTTCCTGCACGAGGAGATGCGGCGCTATTCTGCCGGGGCCGCCTGA
PROTEIN sequence
Length: 298
MTDTDWNLIRSFVAVAEAGSLSEAARRLSASQPTLGRHIGELEQALGVTLFRRGRQGYALTEAGSLLYERGKVVSEEAAAFSRLALGSVEAIEGTVRIAASEIVAAYVLPPMLARLGQEEPGIEFEIVASNRVENLLRRDADIAIRMVQPAQNELVARKVTEIPLRTCAAVGYLDRRGRPSVASDLLSHDLIGFDRSDEMVRGFARFLPSIGRSAFRLRSDNHALLWEAVRSGNGIGIGQAPLIARDPIVEAVLPELPLPVLPVWLAMHRDVRTSVRIRRVADFLHEEMRRYSAGAA*