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cn_combo_scaffold_1052_33

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(29072..29716)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003634F79 similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 213.0
  • Bit_score: 344
  • Evalue 1.00e-91
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCV16138.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 207.0
  • Bit_score: 306
  • Evalue 3.30e-80
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 207.0
  • Bit_score: 291
  • Evalue 2.20e-76

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
TTGTCCAGCATTGCCGCAAACCGTCGTGAACTCCAGAAGGCTGAACTGCGGGCCGAACTGGTGGCGGCTGCCCATGCGCTGGTGCGCGAGGAAGGGTACGAGGGCCTGACGATCCGCAAGCTCGCCACCAGGGTCGGCTATGCGCCGATGTCGGTCTATTCCTATTTCGCCGACAAGCATGAGATCCTGATGGCGCTCGCCGAGGACGCCTTCGTCGATCTGGCGCGAAGGATGCGCCGGAACCGACCGGACGATCCGCTCGAAGCGGTCCGTGCAGCACTCACCGAATATGCGGAATTCGGCCTGGGCAATCCGAACGAATACCGGACCGTGTTCATGACCGAGAAGCAGAAGCCGCCGGTCGGAAAGACCTTCGCCGAGATGGAAAGGGGCAACCCCGCCTTCCAGGTGATCATGGAACGCGTGGAAGCCTGCATCGCGGCGGGCAGGATGAAGGGTGACGCACGCGCCTTAGCCACGGTCCTGTGGACCATGGCCCATGGCGCGATCTCGCTGCTGATCACCTTCCCCTTCTATCCGTTCGGCGACCAGAAGGCCTATGTGATGCGCATCGGGGACGTCGCCCTCGCCGGGCTCGCGGCCGGGGTGATGCCTCCCCTTACGGACGAGCCGGCAAGCTACTGA
PROTEIN sequence
Length: 215
LSSIAANRRELQKAELRAELVAAAHALVREEGYEGLTIRKLATRVGYAPMSVYSYFADKHEILMALAEDAFVDLARRMRRNRPDDPLEAVRAALTEYAEFGLGNPNEYRTVFMTEKQKPPVGKTFAEMERGNPAFQVIMERVEACIAAGRMKGDARALATVLWTMAHGAISLLITFPFYPFGDQKAYVMRIGDVALAGLAAGVMPPLTDEPASY*