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cn_combo_scaffold_1423_43

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 35615..35845

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI0003795371 similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 66.0
  • Bit_score: 82
  • Evalue 1.50e-13
Uncharacterized HTH-type transcriptional regulator y4dJ (Modular protein) {ECO:0000313|EMBL:CDX51965.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 66.0
  • Bit_score: 84
  • Evalue 9.30e-14
helix-turn-helix family protein similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 68.0
  • Bit_score: 71
  • Evalue 1.30e-10

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
ATGAACCTTCGAAATGTCTTTGGTTTCAATCTGCGGCGAATTCGCCGGGAACGCCAGCTTTCGCAAGAGCAATTAGCCCGACTCGCCGGTTGTGCTCGGGCCTACCTAAGTGGCGCAGAAGCAGGGCGCCGTAACGCCACGTTGGATATGCTGGAGGCATTCGCCAAGGTGTTAGAGGTAGAACCCGGCGTTCTTCTGAGGCATCCCGGCGCGGACTGCGACAAGAAATAA
PROTEIN sequence
Length: 77
MNLRNVFGFNLRRIRRERQLSQEQLARLAGCARAYLSGAEAGRRNATLDMLEAFAKVLEVEPGVLLRHPGADCDKK*