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cn_combo_scaffold_1423_44

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 35986..36711

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEB539 related cluster n=1 Tax=unknown RepID=UPI0003CEB539 similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 241.0
  • Bit_score: 220
  • Evalue 1.90e-54
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:CDX12004.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 233.0
  • Bit_score: 240
  • Evalue 2.50e-60
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 242.0
  • Bit_score: 219
  • Evalue 9.10e-55

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGGACCGCATAGAGTTCGCAAAACTTAGAGGTGCGCTCGCGCGCATTGATGCGGCGACTTCGCCAGCAGAGGTACTGGACGCGCTGGTTAACACCTTGAGGCCTTTCGGCTTTCATCATCTGCTCATTACAGGGTTGCCATTACCGCAACAGGGGCCGTGGCAGCGCGAAATAATATACGATGGCTGGCCAGTGGAGTGGCTGGAGCGCTACCTCGCAAGCGGGCACTTCGCCCATGATCCCTGTGCCCTGCGGTGTCGCATCTCCGGACTTCCATTTGCCTGGCACGAGCTGTCGCCCGGTCAAATGACCAAGGGGCAGCTGCGTGTCATGGATGAGGCAGCGGAGTTCGGACTAAACGACGGGTTCTGCATTCCTATCCACGAGCCACGGAGAGCCCCAGCGGTCGTGACCGCGGCCGGAAAACGCATAGAGTTTGCCGCGGGAGATGTTCCTTTCCTCGAAACTGTGTGCCTGCAAGCATTCAGGGCGTTGCGCCGGCTGATGGCCGAAGGAAGTGAGATCGACCTCAAGCTGACTGATCGAGAGCGCGAGGTGCTGACATGGATAGCGGCCGGCAAGGCGGCCGAGGACGTAGCCTGTATTCTTCGCATCTCCAGATTCACCGTTGAGCGACATCTGAGCAACGTCCGGGAAAAGCTCGATGTCGTAAACACGATCCAGGCGGTTGTGGAGGCCATGCGGCGCGGGGAGATTCATCCCTGA
PROTEIN sequence
Length: 242
MDRIEFAKLRGALARIDAATSPAEVLDALVNTLRPFGFHHLLITGLPLPQQGPWQREIIYDGWPVEWLERYLASGHFAHDPCALRCRISGLPFAWHELSPGQMTKGQLRVMDEAAEFGLNDGFCIPIHEPRRAPAVVTAAGKRIEFAAGDVPFLETVCLQAFRALRRLMAEGSEIDLKLTDREREVLTWIAAGKAAEDVACILRISRFTVERHLSNVREKLDVVNTIQAVVEAMRRGEIHP*