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cn_combo_scaffold_1617_2

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(660..1820)

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369925C similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 386.0
  • Bit_score: 756
  • Evalue 1.20e-215
Putative spermidine/putrescine transporter subunit periplasmic-binding component of ABC superfamily transporter {ECO:0000313|EMBL:CDX26304.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphapro similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 386.0
  • Bit_score: 703
  • Evalue 1.60e-199
family 1 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 386.0
  • Bit_score: 700
  • Evalue 2.20e-199

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGAAATCAATTCTGAAATCCTGCACGGCCATAGCCTTGGCGTGCAGCTTTTCCGGCCAGGCCTTGGCGCAGGAGATGCTGAAGGAGGTTGGCAAGGGTGAAGGCCAGCTCAACATCATCGCTTGGCCCGGCTACATCGAGCGCGGCGAGACCGACAAGAACTACGACTGGGTGACGGATTTCGAAAAGCAGACTGGCTGCAAGGTCAACGTCAAGACCGCTGCCACCTCGGACGAGATGGTCGCGCTGATGAACGAGGGCGGGTTCGACCTTGTCACCGCCTCGGGCGACGCATCGCTGCGGCTGGTCGCCGGCAAGCGCGTCCAGCAGATCAACACCGACCTCATCAAGAGCTGGTCGACGATCGACGAGCGCCTCAAGGATGCGCCCTGGTTCACCGTCGACGGCAAGCACTACGGCGTGCCCTACCAGTGGGGTCCGAACGTGCTGATGTACAACACCAACGTCTTCAAGGAGGCGCCCAAGAGCTGGAACGTCGTCTTCGAGGAGATGAACCTGCCCGACGGCAAGTCCAACAAGGGCCGCGTCCAGGCGTATGATGGCGCCATCCACATCGCCGACGCCGCCAACTACCTGATGGCCCACAAGCCCGAGCTCGGCATCAAGGATCCCTACGAGCTCAACGAGGACCAGTACAAGGCCGCCCTCGACCTGCTGCGCCAGCAGCGCACGCTCGTCGGCCGCTATTGGCACGACGCCATGATCCAGGTCGACGACTTCAAGAACGAGGGCGTGGTGGCCTCCGGTTCGTGGCCGTTCCAGGTCAACCTTCTGGCCTCCGAAAAGCAGCCGGTCGCCTCGACCGTGCCGGAAGAGGGTGCGACGGGATGGGCGGACACGACGATGATGCATGTCGATGCCGCCAATCCGAATTGCGCCTATATGTGGCTCGAGCACTCGCTGAACCCGAAGCTGCAGGGCGACCTCGCTTCCTGGTTCGGCTCCAACCCGACTGTGCCGGCGGCCTGCCAGGGCAATGCGCTGCTCGGTGACGAGGGCTGCAAGCCCAACGGCTTCGAGGACTTCGCCAAGATCAGGTTCTGGAAGACGCCGGTGTCGAAATGCGCCAGCCAGAACGACCAGTGCGTGCCCTATTACCGCTGGGTGTCGGACTATATCGGCGTGATCGGCGGCCGCTGA
PROTEIN sequence
Length: 387
MKSILKSCTAIALACSFSGQALAQEMLKEVGKGEGQLNIIAWPGYIERGETDKNYDWVTDFEKQTGCKVNVKTAATSDEMVALMNEGGFDLVTASGDASLRLVAGKRVQQINTDLIKSWSTIDERLKDAPWFTVDGKHYGVPYQWGPNVLMYNTNVFKEAPKSWNVVFEEMNLPDGKSNKGRVQAYDGAIHIADAANYLMAHKPELGIKDPYELNEDQYKAALDLLRQQRTLVGRYWHDAMIQVDDFKNEGVVASGSWPFQVNLLASEKQPVASTVPEEGATGWADTTMMHVDAANPNCAYMWLEHSLNPKLQGDLASWFGSNPTVPAACQGNALLGDEGCKPNGFEDFAKIRFWKTPVSKCASQNDQCVPYYRWVSDYIGVIGGR*