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cn_combo_scaffold_1617_3

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1948..2859)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E776A similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 303.0
  • Bit_score: 571
  • Evalue 7.20e-160
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY83497.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 303.0
  • Bit_score: 530
  • Evalue 1.20e-147
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 303.0
  • Bit_score: 529
  • Evalue 5.20e-148

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Taxonomy

Mesorhizobium sp. LNHC221B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCCTTCACGCTTCGCCAGTTGCAGTTCTTCGTCGCCGTCGCCGAGCAGGGCACGATCTCGCGCGCGGCGCAGAACCTGTCGATCTCGCAGTCGTCGGTCACCGAGGCGATCAGGGAACTGGAGGCCGACCTCGGCGTCGAACTGTTCGAGCGCCATCCACGCGGCCTCAACATCACCCACAAGGGCCACCAGTTCCTGCGTCACGCCACCAAGATCCTGGCCGACGTGTCGGACGCCCGCCGCACATTCTTCGGCGGTCATGCCCCGACCACCGGCCAGCTCAAGCTAGGGGTCACTTCCCTGGTTGCCGGCTATGTGCTGTCGGACCTTCTGGCCCGCTATCGGCGGGCGCATCCGGCGGTCGACATCTCGGCCATCGAGGACAATGGCGACTATCTCGAGCACCTGCTCGTGGGCGGCAAGCTCGACGTCGCCGTCATGGTGACCTCAAACCTGCGCGACCGCATGGCGCTGCAGTCGGAAATCCTCGAGGTCTCGGCCTATCGTCTCTGGCTGCCGCTCGGCCATCCTCTGGCCTCCGCCGAGATCATCGGCGTCGGTGACATCGCCACCGAACCGCTGATCATGCTGTCGGTCGACGAGATCGAGGAGAACACCGGCAAGCTGCTTTCGGCCATTGGGGCCAAGCCGCATGTCGCCTTCCGCACCCGCTCCGTCGAGGCAGTGCGCTCGCTGGTAGCCACCGGCGCAGGCGTGGCGCTCCTGCCCGACCTCGTCTACCGGCCATGGTCGCTCGAAGGCGACCGCATCGAATCCCGCGACGTGTCGGGCTCGCTTCCCGTCGTGCAGGTCGGCATGGTCTGGCGACGGGGATCCTCGCTTCCGGCCGCCGCACGCGATTTCATCGGCATTGCCCAAGGACAGAGGACCGTCCGCCAGAAGCTGTGA
PROTEIN sequence
Length: 304
MAFTLRQLQFFVAVAEQGTISRAAQNLSISQSSVTEAIRELEADLGVELFERHPRGLNITHKGHQFLRHATKILADVSDARRTFFGGHAPTTGQLKLGVTSLVAGYVLSDLLARYRRAHPAVDISAIEDNGDYLEHLLVGGKLDVAVMVTSNLRDRMALQSEILEVSAYRLWLPLGHPLASAEIIGVGDIATEPLIMLSVDEIEENTGKLLSAIGAKPHVAFRTRSVEAVRSLVATGAGVALLPDLVYRPWSLEGDRIESRDVSGSLPVVQVGMVWRRGSSLPAAARDFIGIAQGQRTVRQKL*