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cn_combo_scaffold_1853_2

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 467..1354

Top 3 Functional Annotations

Value Algorithm Source
Glycosyl transferase family 2 n=2 Tax=Sinorhizobium medicae RepID=A6U8X0_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 267.0
  • Bit_score: 415
  • Evalue 4.90e-113
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EZQ13350.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 263.0
  • Bit_score: 433
  • Evalue 1.90e-118
glycosyl transferase family protein similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 267.0
  • Bit_score: 415
  • Evalue 1.40e-113
  • rbh

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCAATCGTCCTCCTGTCTCAGCACCCTCCCCAAGCAGAACACACGCACAGTGGAATCAAGATTCCCGGTGTCCATGTTCATTATCTGCCTCAACGAGGAGGACTACATCGGCAATTGCATCGATAGCCTGCGTGGCTGCAGCGACATCGTCATAGTCGACTCGGGCTCGACCGACGGAACGCTGCCGCTCATACAGTCTTACATCGAAAAGGGCTGGCCGATCAGGTTGTTCTCCGAGAAGTGGCGGGGATATGCCGGCCAGAAGCAATTCGCACTCGACCAATGTCGGGAGGACTGGTGCTTCAATATAGATGCCGACGAGCGCTTCGACGAGGCGTTGCGAACGGCGTTGCCGGATCTCCTGGCAGCGGACGAGTCCGTCGTCGGATGGCGGATCGCGCGCCGACCTTACCTCATCGGTTATGGTTACACGCCCGAGCATGTGCATGAACGGCGTAACCTCAGACTCATTCGCCGCGGGCGTGGTCGTTATGACCTTGCGCAGCGAGTGCATGAGGGCATTCGCCCGGACGGGCGCGTAAAGGCTTCTCCAAAAGGGAGCTTGCTTCACTTCCGTCCTCTTCCGATGGATCAGCAAGTTCTCAAGGAGAATAAATATTCATCGCTCAAGGCCGACCAGTTGGTTGAGGCCGGAAATGGACCGCGCCGGTTCAGGCTTGTATTCAATCCGCCTATGTTTTTCCTTAGGCTTTACTTCAGAAATGGCCTGTGGCGCTGCGGATTTACCGGCTTCATCGAAGCAATGACCGGGGCGGTCTATTCCTTCATGACCGAAGCAAAGATATACCAGCGCAATGCGCTTCGTACCAAGCCGTCGTTCGATGACGTGGATCGAGGTGTGCGAGTGGGGCAGGGGAACGACTGA
PROTEIN sequence
Length: 296
MQSSSCLSTLPKQNTRTVESRFPVSMFIICLNEEDYIGNCIDSLRGCSDIVIVDSGSTDGTLPLIQSYIEKGWPIRLFSEKWRGYAGQKQFALDQCREDWCFNIDADERFDEALRTALPDLLAADESVVGWRIARRPYLIGYGYTPEHVHERRNLRLIRRGRGRYDLAQRVHEGIRPDGRVKASPKGSLLHFRPLPMDQQVLKENKYSSLKADQLVEAGNGPRRFRLVFNPPMFFLRLYFRNGLWRCGFTGFIEAMTGAVYSFMTEAKIYQRNALRTKPSFDDVDRGVRVGQGND*