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cn_combo_scaffold_1853

Alias: MES20_42

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1853_1
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..312)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RZT2_RHIET
Uncharacterized protein {ECO:0000313|EMBL:EZQ13351.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzan
hypothetical protein
cn_combo_scaffold_1853_2
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

467..1354
DNA (888bp) protein (296aa)
Glycosyl transferase family 2 n=2 Tax=Sinorhizobium medicae RepID=A6U8X0_SINMW
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EZQ13350.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps
glycosyl transferase family protein rbh
cn_combo_scaffold_1853_3
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1354..2388
DNA (1035bp) protein (345aa)
lipopolysaccharide biosynthesis protein n=1 Tax=Rhizobium giardinii RepID=UPI00037E4973
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EXL02865.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aqu
lpsE; lipopolysaccharide core biosynthesis glycosyl transferase LpsE rbh
cn_combo_scaffold_1853_4
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2385..2855)
DNA (471bp) protein (157aa)
ArsR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D86FD
AsnC family transcriptional regulator {ECO:0000313|EMBL:EHK57432.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
AsnC family transcriptional regulator
cn_combo_scaffold_1853_5
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3100..4074
DNA (975bp) protein (325aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriacea
thioredoxin reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037AA631
thioredoxin reductase
cn_combo_scaffold_1853_6
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4107..5003
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003744CAB
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDX15709.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Me
transcriptional regulator
cn_combo_scaffold_1853_7
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5013..5510)
DNA (498bp) protein (166aa)
UPI0003CE1F93 related cluster n=1 Tax=unknown RepID=UPI0003CE1F93
Isoprenylcysteine carboxyl methyltransferase protein {ECO:0000313|EMBL:ESY88838.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium
putative protein-S-isoprenylcysteine methyltransferase
cn_combo_scaffold_1853_8
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6217..7176)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000374DDFE
TMAO/DMSO reductase {ECO:0000313|EMBL:EIM72133.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aqu
sulfite oxidase subunit YedY
cn_combo_scaffold_1853_9
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7704..7994)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Ahrensia kielensis RepID=UPI0003736E96
Excinuclease ABC C subunit domain protein
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:EUB96878.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
cn_combo_scaffold_1853_10
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8401..10452)
DNA (2052bp) protein (684aa)
elongation factor G n=1 Tax=Hoeflea sp. 108 RepID=UPI000368C3F4
Small GTP-binding domain protein {ECO:0000313|EMBL:AID31955.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
fusA; elongation factor G
cn_combo_scaffold_1853_11
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10741..11955
DNA (1215bp) protein (405aa)
Putative flavoprotein involved in K+ transport n=1 Tax=Rhizobium sp. CF122 RepID=J3BUA4_9RHIZ
Putative flavoprotein involved in K+ transport {ECO:0000313|EMBL:EJL58291.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g
FAD-dependent oxidoreductase
cn_combo_scaffold_1853_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12069..13916)
DNA (1848bp) protein (616aa)
MFS transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000360B845
General substrate transporter {ECO:0000313|EMBL:AEH89007.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
General substrate transporter
cn_combo_scaffold_1853_13
Hoeflea sp. 108, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14264..14434)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037AA95C
cn_combo_scaffold_1853_14
unknown

Not on your lists

comp(14561..14908)
DNA (348bp) protein (116aa)

This feature has no annotations

cn_combo_scaffold_1853_15
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15170..16372)
DNA (1203bp) protein (401aa)
Aspartate aminotransferase A (AspAT) {ECO:0000313|EMBL:CDX20722.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDX20722.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phylloba
aspartate aminotransferase (EC:2.6.1.1)
aspartate aminotransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003762193
cn_combo_scaffold_1853_16
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16630..17532
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003736CB6
Diguanylate phosphodiesterase {ECO:0000313|EMBL:CDX43185.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
EAL domain-containing protein
cn_combo_scaffold_1853_17
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17525..18358
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000366E733
Diguanylate phosphodiesterase {ECO:0000313|EMBL:ESY76844.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
hypothetical protein
cn_combo_scaffold_1853_18
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18725..18934)
DNA (210bp) protein (70aa)
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003606F19
cold-shock protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEH86868.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
cn_combo_scaffold_1853_19
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19217..19519
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368E396
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57375.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
cn_combo_scaffold_1853_20
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19649..19972
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368E396
Uncharacterized protein {ECO:0000313|EMBL:CDX15682.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_1853_21
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20083..20658)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003805108
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ESX78812.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;
methylated-DNA-protein-cystein methyltransferase
cn_combo_scaffold_1853_22
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20824..21852
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B7931
Lytic transglycosylase catalytic {ECO:0000313|EMBL:CDX44269.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein
cn_combo_scaffold_1853_23
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21849..22331
DNA (483bp) protein (161aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EXH8_9RHIZ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCV08713.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
GCN5-like N-acetyltransferase
cn_combo_scaffold_1853_24
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23042..23461
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TX02_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE10990.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
cn_combo_scaffold_1853_25
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23461..24600
DNA (1140bp) protein (380aa)
Membrane fusion protein (MFP) component of efflux pump, signal anchor n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TX01_9BRAD
Membrane fusion protein (MFP) component of efflux pump, signal anchor {ECO:0000313|EMBL:CCE10989.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae
HlyD family protein secretion protein
cn_combo_scaffold_1853_26
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25142..25840)
DNA (699bp) protein (233aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y3D3_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EHH13793.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes
Transcriptional regulator
cn_combo_scaffold_1853_27
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26071..26505
DNA (435bp) protein (145aa)
UPI0003CFE2FA related cluster n=1 Tax=unknown RepID=UPI0003CFE2FA
Endoribonuclease {ECO:0000313|EMBL:KGM33586.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06
endoribonuclease L-PSP
cn_combo_scaffold_1853_28
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26614..26877)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003783EBC
Uncharacterized protein {ECO:0000313|EMBL:CCE10383.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
hypothetical protein
cn_combo_scaffold_1853_29
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27076..27441)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B1FE0
Uncharacterized protein {ECO:0000313|EMBL:CDX43144.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
cn_combo_scaffold_1853_30
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27614..27988)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E58C7
Uncharacterized protein {ECO:0000313|EMBL:ESX80744.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Displaying items 1-30 of 31 in total

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