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cn_combo_scaffold_1853_18

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(18725..18934)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003606F19 similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 69.0
  • Bit_score: 131
  • Evalue 4.40e-28
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 5.60e-26
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AEH86868.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 67.0
  • Bit_score: 122
  • Evalue 2.80e-25

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Taxonomy

Mesorhizobium opportunistum → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCTACTGGAACCGTTAAGTGGTTCAACGCAACCAAGGGCTTCGGCTTCATTCAGCCCGACGCTGGTGGTGCGGACGTGTTCGTCCACATCTCGGCTGTCGAGCGTTCGGGCATGGGCTCGCTGGCCGATGGCCAGAAGGTTAGCTTCGAGATCGAGCAGGACCGTCGCACGGGCCGCTCGTCTGCCGGAGCTCTGAAGGCAATCTGA
PROTEIN sequence
Length: 70
MATGTVKWFNATKGFGFIQPDAGGADVFVHISAVERSGMGSLADGQKVSFEIEQDRRTGRSSAGALKAI*