ggKbase home page

cn_combo_scaffold_1934_1

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(3..734)

Top 3 Functional Annotations

Value Algorithm Source
Putative phage integrase n=1 Tax=Rhizobium sp. RepID=L0NAK3_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 244.0
  • Bit_score: 284
  • Evalue 8.20e-74
Integrase {ECO:0000313|EMBL:EYR80086.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 244.0
  • Bit_score: 376
  • Evalue 2.90e-101
integrase similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 144.0
  • Bit_score: 236
  • Evalue 7.30e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGTTCCTCACCAAGGACGGTCGTGTTGCCCGCGCAACCTACTGGGGGAACGTCGCGGAGCAAATCCGAGATTCCTTGGGCGGCAACACTCTGGATCACGGATCAGACACAGCCCGGATGTCGGCCCGATTAGCTGGCCTGAGCTGGGACGATCTAACCGAAGCCGAGCGGCACCAATGCAAGGAAGTCGTTCACCGCGCCGGCATCGACCTCGCAGAAGCGCTGAAAGCCCGATATGAAGGCGACTTCGAGTTCGAGCCCAGGAGCAAATTGCTTCGGCAAGCCTTGTCAGAGGTTGCCCCCACTGCCGCTCCCGTTCAACAACAGCAACCGCAGTCAAAGGCAGAGCCGCTATTTTCCACGGTCTATCCGAGCTTCATCGAAGGCCAGCATCGGCGCGGCGAATGGCGTCAGCAAACCGGCAACCAGGCAGATGCCACCTACCGACTGTTCATCCAGATTTGCGGTGACAAACCGGTAAGCCAGTATGGGCGGACGGATGCCGGCCAATTCCGCGCAACGGCGGAGCGTATGCCTTCCGACTATGGAAAGGCGGCTTCCTACAAGACTTTTCCGCCCGAAGAGATCATCCGCGCCTATGAAAAGCTGCCGGAGGAGCGGAAGCCGCCGCTGCTGACGCAGAAGACCATCAAACGCCATTTCTCGGCTCTTTCCGCGATGTGGAGCGAGGCCATCGCAACCGGCAAGGCCACGGAAAACATCTTTTCCGGC
PROTEIN sequence
Length: 244
MFLTKDGRVARATYWGNVAEQIRDSLGGNTLDHGSDTARMSARLAGLSWDDLTEAERHQCKEVVHRAGIDLAEALKARYEGDFEFEPRSKLLRQALSEVAPTAAPVQQQQPQSKAEPLFSTVYPSFIEGQHRRGEWRQQTGNQADATYRLFIQICGDKPVSQYGRTDAGQFRATAERMPSDYGKAASYKTFPPEEIIRAYEKLPEERKPPLLTQKTIKRHFSALSAMWSEAIATGKATENIFSG