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cn_combo_scaffold_1934_10

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(10428..11585)

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease D (EC:3.1.13.5) similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 383.0
  • Bit_score: 671
  • Evalue 1.80e-190
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=765698 species="Bacteria; Proteobacteria; Alph similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 383.0
  • Bit_score: 671
  • Evalue 9.10e-190
ribonuclease D n=1 Tax=Hoeflea sp. 108 RepID=UPI000363D285 similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 383.0
  • Bit_score: 726
  • Evalue 1.30e-206

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGCATGTAATAACGACCCAGGAAGAACTCGAAACCGCTGTTGCCGCGCTCGAAAAATCCAACTTCGTCACGGTCGACACCGAGTTCATTCGCGAAACCACTTTCTGGCCCGAACTCTGCCTGATCCAGATGGCGGCGCCCGGCACCTCCGCGCTCGTCGACCCGCTCGCACCCGGGCTCGACCTCCAGCCGTTCTTCCGGCTCATGGCCAACGAGGCCGTGACGAAGGTGTTCCACGCCGCCCGCCAGGACATCGAGATCATCTTCCATCTGGGGAACCTGATCCCGCATCCGGTGTTCGACACCCAGGTGGCGGCGATGGTCTGCGGCTTTGGCGACAGCGTCTCCTACGAGCAGATCGTTCAGAAGGTGACCGGAGGCCGGATCGACAAGTCGTCGCGCTTCACCGACTGGCGCCACCGGCCGCTGTCGGACAAGCAGCTCGACTATGCGCTGGCCGACGTGACCCATCTCATCGGTGTCTACGAGCACCTCAAGTCCGAGCTCGAGCGCGAGGACCGCGCGCACTGGCTGACCGAGGAAATGGAGGTCCTGACCTCACGCGAGACCTACGACCCGCATCCCGAAGACGCCTGGAAGCGGCTCAAGATGCGCTTGCGCAAGCCCCAGGAACTGGCCGTGGTGCAGGCGGTCGCAGCATGGCGCGAGCGCGAGGCGCGCGAACGCAACGTCCCCCGTGGCCGGGTGCTCAAGGACGATGCCATCTACGAGATCGCCCAGCAGGCGCCGCGGGACGCTGCTGCCCTTGCGCGGTTGCGCACCACGCCCAAGGGCTGGGAAAGGTCGTCCTCGGCGGCGGCTCTGCTGACCGTGGTCAACGCCGCGCTCGACACGCCACGGGACCAGATGCCCAGGCTGCCCAAGACGTTCCAACCGCCAGAGGGCTCTAGCGCTGCAGCGGAACTGCTCAAGGTCCTGCTGCGCCTCGTGTCGGAGAAGGAAGGCGTTGCGCCCAAGGTGCTCGCTTCCGGCGACGATATCGACCGCATCGCCGCCGAAGGCGAAGCCGCGGATGTTCCCGCACTCCAGGGCTGGCGCCGCGCCGTGTTCGGCGAGGCAGCACTGCGCCTGGTGCGCGGCGAGATCGCCATCCGGTTCGACAAGCGGCGGATCGCGATCTTCGACGTAACGGCCTGA
PROTEIN sequence
Length: 386
MHVITTQEELETAVAALEKSNFVTVDTEFIRETTFWPELCLIQMAAPGTSALVDPLAPGLDLQPFFRLMANEAVTKVFHAARQDIEIIFHLGNLIPHPVFDTQVAAMVCGFGDSVSYEQIVQKVTGGRIDKSSRFTDWRHRPLSDKQLDYALADVTHLIGVYEHLKSELEREDRAHWLTEEMEVLTSRETYDPHPEDAWKRLKMRLRKPQELAVVQAVAAWREREARERNVPRGRVLKDDAIYEIAQQAPRDAAALARLRTTPKGWERSSSAAALLTVVNAALDTPRDQMPRLPKTFQPPEGSSAAAELLKVLLRLVSEKEGVAPKVLASGDDIDRIAAEGEAADVPALQGWRRAVFGEAALRLVRGEIAIRFDKRRIAIFDVTA*