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cn_combo_scaffold_1964_5

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2135..3364)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraI n=1 Tax=Afipia birgiae RepID=UPI00030E0E5C similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 414.0
  • Bit_score: 665
  • Evalue 3.80e-188
Conjugal transfer protein TraI {ECO:0000313|EMBL:ETR77819.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10. similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 412.0
  • Bit_score: 655
  • Evalue 5.50e-185
conjugation TrbI family protein similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 414.0
  • Bit_score: 638
  • Evalue 1.40e-180

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
GTGAGCGATATCGATCCCCGGAAAGAAGAAGATCATGAAGAAGACGGCGAGGCCCGTCCTCTAACAGGCGAACCACCCAGTCCCGCGCCGATGCGGCTACGGGCAGATGCGCCGCGCGTCACCCGGCTTTCCCGCAAAGTGCTGGTAGGCGTCGGCCTGGTCGCCAGCCTCGGGATCGGCGGCGCGCTCATCTATGCGCTCCAGACTCGCGACGCCGGAACCGGCAATGAGGAACTCTATTCCGTCGACAACCGCACCACGGCGGACGGCATCGCGGGCCTCCCACGCGACTACACTGGCCCTGTTCTTGGACAGCCTCTGCCCGGCGATCTCGGCCGCCCGATCCTCGACGCCCAGAACCGCGGCCAGTCAGTGCCTGTTCCGGGCATGGCCGCTCCCGATCCCGGCATCAGCGCGGAGGAACAACGTCGCATGCAGGAACTGGAAGCAGCCAGGACCGCACGGCTGTTCGCTCCGACGGAAACGCGCACCGGCAACACAATGGCGGGATCAGGCGATAGCCCGGCCGCCACTCCCATGCCGTCCCTGGAAGGTCTTGGCCTTGCGCCGCAGCCCTCGACGCCCACTGCGCAGGAACGCCAGCTTGCTTTCCTCAATGCCCCCGTCGACCGGCGAACCGTATCGGCTGATCGGCTCGCCGCCCCTGCGTCTCCCAATATTCTTCAGGCTGGCTCTATCATCTCCGCCGCACTGATCACCGGCATCCGTTCGGACCTTCCTGGCCAGATCACCGCACAGGTGACGGAAAACATCTATGACAGCCCGACCGGCCGTATCCTGCTGGTGCCGCAGGGCACGCGTATTATAGGCGAATACGACAATGGCGTCGGCTTCGGCCAGCGCCGCGTGCTGTTGGTCTGGAACCGGTTGATCCTGCCCAACGGCAAGTCCATCGTTCTCGAGCGGCAGCCAGGTGCAGATACGCAAGGCTATGCCGGTCTCGAAGACGGCGTCGATTATCACTGGTGGGATCTGGCAAAAGCCGCAGGTCTCTCGACTTTGCTGGCTGTTGGCACGGAATTGGCCGTCGACGATGATGACCGCCTCCTTAGTGCTATCCGTGACGGGGCGCAGGGCACCATCAACGACGCCGGTCAGCAAATCGTTCGCCGCCAGCTCAATGTGCAGCCAACGCTCACCATCCGTCCGGGATTCCCGGTCCGCGTGATCGTCACTCGCGATCTCGTCCTCGAACCCTACGGAGGCTGA
PROTEIN sequence
Length: 410
VSDIDPRKEEDHEEDGEARPLTGEPPSPAPMRLRADAPRVTRLSRKVLVGVGLVASLGIGGALIYALQTRDAGTGNEELYSVDNRTTADGIAGLPRDYTGPVLGQPLPGDLGRPILDAQNRGQSVPVPGMAAPDPGISAEEQRRMQELEAARTARLFAPTETRTGNTMAGSGDSPAATPMPSLEGLGLAPQPSTPTAQERQLAFLNAPVDRRTVSADRLAAPASPNILQAGSIISAALITGIRSDLPGQITAQVTENIYDSPTGRILLVPQGTRIIGEYDNGVGFGQRRVLLVWNRLILPNGKSIVLERQPGADTQGYAGLEDGVDYHWWDLAKAAGLSTLLAVGTELAVDDDDRLLSAIRDGAQGTINDAGQQIVRRQLNVQPTLTIRPGFPVRVIVTRDLVLEPYGG*