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cn_combo_scaffold_1964

Alias: MES20_48

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1964_1
Sinorhizobium sp. M14, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..660)
DNA (660bp) protein (220aa)
ArsRC n=1 Tax=Sinorhizobium sp. M14 RepID=E9KN53_9RHIZ
ArsR family transcriptional regulator
ArsRC {ECO:0000313|EMBL:AFR74890.1}; Transcriptional regulator/arsenate reductase bifunctional protein {ECO:0000313|EMBL:ADO95174.1}; TaxID=430451 species="Bacteria; Proteobacteria; Alphaproteobacteri
cn_combo_scaffold_1964_2
unknown

Not on your lists

comp(1026..1427)
DNA (402bp) protein (134aa)

This feature has no annotations

cn_combo_scaffold_1964_3
unknown

Not on your lists

comp(1446..1721)
DNA (276bp) protein (92aa)

This feature has no annotations

cn_combo_scaffold_1964_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1903..2133)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003745B11
Uncharacterized protein {ECO:0000313|EMBL:CDN95847.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agroba
hypothetical protein
cn_combo_scaffold_1964_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2135..3364)
DNA (1230bp) protein (410aa)
conjugal transfer protein TraI n=1 Tax=Afipia birgiae RepID=UPI00030E0E5C
Conjugal transfer protein TraI {ECO:0000313|EMBL:ETR77819.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.
conjugation TrbI family protein
cn_combo_scaffold_1964_6
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3361..4437)
DNA (1077bp) protein (359aa)
P-type conjugative transfer protein TrbG n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SJS7_RHOPH
P-type conjugative transfer protein TrbG
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:CCG08242.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;"
cn_combo_scaffold_1964_7
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4434..5117)
DNA (684bp) protein (228aa)
UPI0003CF1D4B related cluster n=1 Tax=unknown RepID=UPI0003CF1D4B
Conjugal transfer protein TrbF {ECO:0000313|EMBL:ESY62548.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
type IV secretory pathway, TrbF component
cn_combo_scaffold_1964_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5117..5467)
DNA (351bp) protein (117aa)
Conjugal transfer protein TrbL n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNX2_9SPHN
Conjugative transfer protein TrbL {ECO:0000313|EMBL:KFC64444.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC
trbL; conjugal transfer protein TrbL
cn_combo_scaffold_1964_9
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5407..5640)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B1595
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:KEQ52176.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" sou
helix-turn-helix domain-containing protein
cn_combo_scaffold_1964_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5642..6010)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UC99_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP55077.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
hypothetical protein
cn_combo_scaffold_1964_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6011..6322)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003609453
Uncharacterized protein {ECO:0000313|EMBL:EKY27485.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas d
transcriptional regulator
cn_combo_scaffold_1964_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6315..6605)
DNA (291bp) protein (97aa)
UPI0003D66D7C related cluster n=1 Tax=unknown RepID=UPI0003D66D7C
Transcriptional regulator {ECO:0000313|EMBL:ETI60089.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium s
putative transcriptional regulator
cn_combo_scaffold_1964_13
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6602..8011)
DNA (1410bp) protein (470aa)
Integrase family protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UCA9_RHIRD
Integrase family protein {ECO:0000313|EMBL:EGP55087.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; A
integrase family protein
cn_combo_scaffold_1964_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8284..9915
DNA (1632bp) protein (544aa)
AMP-dependent synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E02A4
Acetyl-CoA synthetase protein {ECO:0000313|EMBL:EHK57924.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi
acetyl-CoA synthetase
cn_combo_scaffold_1964_15
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9912..11198)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037310E8
Uncharacterized protein {ECO:0000313|EMBL:CDX34224.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_1964_16
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11195..12604)
DNA (1410bp) protein (470aa)
polysaccharide biosynthesis associated protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E4C36
Polysaccharide biosynthesis associated protein {ECO:0000313|EMBL:ESX22956.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" so
multi antimicrobial extrusion protein MatE
cn_combo_scaffold_1964_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12702..12932
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375E7E2
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57929.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
cn_combo_scaffold_1964_18
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13090..15816)
DNA (2727bp) protein (909aa)
preprotein translocase subunit SecA n=1 Tax=Hoeflea sp. 108 RepID=UPI00036ECFAD
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
preprotein translocase subunit SecA
cn_combo_scaffold_1964_19
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15838..16971
DNA (1134bp) protein (378aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriac
peptidylprolyl isomerase n=1 Tax=Hoeflea sp. 108 RepID=UPI000362899C
cell binding factor 2
cn_combo_scaffold_1964_20
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17207..18448
DNA (1242bp) protein (414aa)
N-acetylglutamate synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B77BE
glutamate N-acetyltransferase/amino-acid acetyltransferase
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.
cn_combo_scaffold_1964_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18450..19223
DNA (774bp) protein (258aa)
acetyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI000370B85F
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57897.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
acetyltransferase
cn_combo_scaffold_1964_22
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19225..19638
DNA (414bp) protein (138aa)
NTP pyrophosphohydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003646EEF
mutator MutT protein
Mutator MutT protein {ECO:0000313|EMBL:ADV10754.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri
cn_combo_scaffold_1964_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19787..20104
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380090A
Uncharacterized protein {ECO:0000313|EMBL:CDX24126.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium pluri
hypothetical protein
cn_combo_scaffold_1964_24
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20208..20378
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037DC819
Component of type IV pilus {ECO:0000313|EMBL:EHK57890.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
cn_combo_scaffold_1964_25
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20388..21257)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B502E
Uncharacterized protein {ECO:0000313|EMBL:CCV11374.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_1964_26
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21372..22199
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037600C6
Amidophosphoribosyltransferase {ECO:0000313|EMBL:ESX22968.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizob
phosphoribosyltransferase
cn_combo_scaffold_1964_27
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22226..22495
DNA (270bp) protein (90aa)
glutaredoxin n=1 Tax=Hoeflea sp. 108 RepID=UPI00037779C8
Glutaredoxin 3 {ECO:0000313|EMBL:CCV11376.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661
Glutaredoxin, GrxC family
cn_combo_scaffold_1964_28
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22505..23371
DNA (867bp) protein (289aa)
amidohydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003614B2B
Amidohydrolase {ECO:0000313|EMBL:ESY76328.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B
nitrilase, nitrilase 1 like protein
cn_combo_scaffold_1964_29
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23368..23793
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C276D
Uncharacterized protein {ECO:0000313|EMBL:ESY98030.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_1964_30
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24195..24539)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C189E
Uncharacterized protein {ECO:0000313|EMBL:ESZ67617.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
Displaying items 1-30 of 33 in total

View Taxonomy