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cn_combo_scaffold_2379_5

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 4974..5555

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003828CB1 similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 193.0
  • Bit_score: 353
  • Evalue 1.10e-94
Transcriptional regulator {ECO:0000313|EMBL:EZQ15753.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauz similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 191.0
  • Bit_score: 304
  • Evalue 8.50e-80
Transcriptional regulator, XRE family with cupin sensor similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 187.0
  • Bit_score: 213
  • Evalue 6.80e-53

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGAAGCGAACGACGCGCCGAAGATCGGCCCGGTGATCCAGAAGGAACGCAAGGAGCGGCATTTGACGCTCGACCGGCTGGCGGCGATCTCGGGCGTGTCGCGTTCGATGCTGTCGCAGATCGAGCGTGGCGAGGCCAACCCGACCTTTGCCGTTTTGTGGTCGCTGACCCAGGCGCTCGGCATCGATTTTTCCCAGCTCATCGCCGGCGGCATTACCCAGCAGCGCAAGGTCGACGCCATCGAGCTGGTGACGCTGGCGCTGACGCCAGAGATCAAGAGCCCGGAAGGCGCCTGGCGGCTGCGCATCCTGAGTTCGCCGGCTCTGGCCGGGCGGGTGGAGTGGTACGGGGTCGAGATCGCGCCAGGGTGCAAGCTGCAGAGCGCGCCGCACGCGCCCGGCACCTTCGAGCACCTTACAGCCAGCACCGACGGCCTTCTGGTCGAGACGGAATACGGGCGACAAGAGCTCAAGACCGGCGAAACCGCGCGCTACCGCGCCGACATCGGCCACGAAATTTCCAACACCGGCACCGAGACGGCGCGGGCGCTGATGGTGGTTCTCTACGACCAGGACGCCTGA
PROTEIN sequence
Length: 194
MEANDAPKIGPVIQKERKERHLTLDRLAAISGVSRSMLSQIERGEANPTFAVLWSLTQALGIDFSQLIAGGITQQRKVDAIELVTLALTPEIKSPEGAWRLRILSSPALAGRVEWYGVEIAPGCKLQSAPHAPGTFEHLTASTDGLLVETEYGRQELKTGETARYRADIGHEISNTGTETARALMVVLYDQDA*