ggKbase home page

cn_combo_scaffold_2379

Alias: MES20_63

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2379_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..916
DNA (915bp) protein (305aa)
glyoxalase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EED43
lactoylglutathione lyase-like lyase
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:AGB43897.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorh
cn_combo_scaffold_2379_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(900..2459)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000360AE3B
glyoxalase/bleomycin resistance protein/dioxygenase family protein
Glyoxalase/bleomycin resistance protein/dioxygenase family protein {ECO:0000313|EMBL:AGS20488.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizo
cn_combo_scaffold_2379_3
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2582..3604)
DNA (1023bp) protein (341aa)
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:EZQ15751.1}; EC=1.1.1.103 {ECO:0000313|EMBL:EZQ15751.1};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona
L-threonine 3-dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00038077A8
L-threonine 3-dehydrogenase Tdh
cn_combo_scaffold_2379_4
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3620..4822)
DNA (1203bp) protein (401aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate CoA ligase n=1 Tax=Hoeflea sp. 108 RepID=UPI000369A764
Glycine C-acetyltransferase
cn_combo_scaffold_2379_5
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4974..5555
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003828CB1
Transcriptional regulator {ECO:0000313|EMBL:EZQ15753.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauz
Transcriptional regulator, XRE family with cupin sensor
cn_combo_scaffold_2379_6
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5574..6332)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00038243C2
Class II aldolase/adducin family protein {ECO:0000313|EMBL:CCV03966.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
ribulose-5-phosphate 4-epimerase-like epimerase or aldolase
cn_combo_scaffold_2379_7
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6392..7027)
DNA (636bp) protein (212aa)
urease accessory protein UreG n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C76CF
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
urease accessory protein UreG
cn_combo_scaffold_2379_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7041..7751)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000371D0FB
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
Urease accessory protein UreF
cn_combo_scaffold_2379_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7708..8262)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F2ED6
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mes
urease accessory protein UreE
cn_combo_scaffold_2379_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8306..8590)
DNA (285bp) protein (95aa)
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003674521
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU52798.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus
cn_combo_scaffold_2379_11
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8709..9023
DNA (315bp) protein (105aa)
Uncharacterized protein n=3 Tax=Rhizobium meliloti RepID=M4IKE4_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK64878.2}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" sou
cn_combo_scaffold_2379_12
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9069..9512)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y467_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH85044.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium oppo
cn_combo_scaffold_2379_13
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9635..10180)
DNA (546bp) protein (182aa)
peroxiredoxin n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D2D8F
Peroxiredoxin {ECO:0000313|EMBL:KGD99939.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizob
putative peroxiredoxin
cn_combo_scaffold_2379_14
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10368..12080)
DNA (1713bp) protein (571aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953
urease subunit alpha n=1 Tax=Hoeflea sp. 108 RepID=UPI0003678943
ureC; urease subunit alpha rbh
cn_combo_scaffold_2379_15
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12080..12385)
DNA (306bp) protein (102aa)
Urease subunit beta {ECO:0000255|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000255|HAMAP-Rule:MF_01954}; TaxID=266835 species="Bacteria
urease subunit beta n=1 Tax=Hoeflea sp. 108 RepID=UPI0003683A2B
urease subunit beta
cn_combo_scaffold_2379_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12397..12987)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003615C99
Protein HupE {ECO:0000313|EMBL:EHK58687.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ1
HupE-UreJ family metal transporter
cn_combo_scaffold_2379_17
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13012..13266)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y461_MESOW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH85038.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium oppo
cn_combo_scaffold_2379_18
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13274..13576)
DNA (303bp) protein (101aa)
ureA; urease subunit gamma (EC:3.5.1.5)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {
urease subunit gamma n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003636589
cn_combo_scaffold_2379_19
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13593..14447)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000362918B
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhi
Urease accessory protein UreD
cn_combo_scaffold_2379_20
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14638..14892
DNA (255bp) protein (85aa)
NodF n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D1F54
NodF {ECO:0000313|EMBL:EXL08668.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
NodF
cn_combo_scaffold_2379_21
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14894..16105
DNA (1212bp) protein (404aa)
beta-ACP synthase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BF833
Beta-ACP synthase {ECO:0000313|EMBL:ESX63937.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC4
beta-ketoacyl synthase
cn_combo_scaffold_2379_22
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16252..16956
DNA (705bp) protein (235aa)
glutathione S-transferase n=1 Tax=Hoeflea sp. 108 RepID=UPI000368193E
Glutathione S-transferase {ECO:0000313|EMBL:ESZ13583.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s
glutathione S-transferase domain-containing protein
cn_combo_scaffold_2379_23
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16997..17605)
DNA (609bp) protein (203aa)
nucleoside triphosphate hydrolase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036997C9
Nucleoside triphosphate hydrolase domain-containing protein {ECO:0000313|EMBL:CDX38562.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhiz
ATPase AAA
cn_combo_scaffold_2379_24
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17674..18765)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B20B6
Uncharacterized protein {ECO:0000313|EMBL:ESZ27152.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_2379_25
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18990..20030
DNA (1041bp) protein (347aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003600C95
Penicillin-binding protein {ECO:0000313|EMBL:ESZ13579.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium
cn_combo_scaffold_2379_26
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20038..20439)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003785E07
Cupin {ECO:0000313|EMBL:EJT07148.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.
cupin 2 domain-containing protein
cn_combo_scaffold_2379_27
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20565..21152)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B5DE0
Uncharacterized protein {ECO:0000313|EMBL:KKC37859.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudi
hypothetical protein
cn_combo_scaffold_2379_trna_1
unknown

Not on your lists

21386..21459
DNA (74bp)
transferRNA
cn_combo_scaffold_2379_28
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21545..21967
DNA (423bp) protein (141aa)
UPI0003CEB893 related cluster n=1 Tax=unknown RepID=UPI0003CEB893
Uncharacterized protein {ECO:0000313|EMBL:ESY02737.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
HNH nuclease
cn_combo_scaffold_2379_29
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21939..22208
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037CFCED
Uncharacterized protein {ECO:0000313|EMBL:ESX50212.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy