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cn_combo_scaffold_2379_10

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(8306..8590)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003674521 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 66.0
  • Bit_score: 91
  • Evalue 4.00e-16
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 70.0
  • Bit_score: 77
  • Evalue 2.20e-12
Uncharacterized protein {ECO:0000313|EMBL:AGU52798.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 70.0
  • Bit_score: 77
  • Evalue 1.10e-11

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
GTGTGCTTTTCGAAGCGTGGCGACGGCACGGAAGTGCTTGAGTTTGCTAAGGAAGCATCCGACGAGATTGCCGAAGTTCTACCGAACATCTGCATCGTCATGCGCATGTCAGAGGCGCATTTCGCTCTTTCCGGACGGGAATTTTTCATCCACATGCCCGTGCTGGTGGCACTTTGCCTCATCGCCATCGCCACCGCAAAAAAGCGATTTCATCTGGCTTTCGTCAGTGCGACTCTGGTGTATCAGCTATCGTGGATCTGGCGACTGTTCGACACCATCGTCTAG
PROTEIN sequence
Length: 95
VCFSKRGDGTEVLEFAKEASDEIAEVLPNICIVMRMSEAHFALSGREFFIHMPVLVALCLIAIATAKKRFHLAFVSATLVYQLSWIWRLFDTIV*