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cn_combo_scaffold_2504_27

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(34184..34900)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF35E4 related cluster n=1 Tax=unknown RepID=UPI0003CF35E4 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 230.0
  • Bit_score: 369
  • Evalue 1.90e-99
Type VI secretion protein {ECO:0000313|EMBL:ESW67923.1}; TaxID=1287334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 230.0
  • Bit_score: 369
  • Evalue 2.70e-99
type VI secretion system lysozyme-related protein similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 239.0
  • Bit_score: 354
  • Evalue 1.80e-95

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Taxonomy

Mesorhizobium sp. LSJC277A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGGCAGCCATCACCAGCAATCCTCGGGCCAAGCGCGAGGCGGTGCAACCATCCCTGTGGGACCGCCTCGTCAACGATTTGCCGGGCCTCGGCTCGGAGATCGACAGCCTGGCAAACACGCTGCGGGAGGAATTGGGAGCGGAGCGCCTCGAGGCGCTGCTGGCCGGAGGGACGCGCGTGATCGACGCGGACACCGATCTTTCGCCTGAGCAGAAGCGCCGGCTGAACCGCCTCATGGCCCAGAACAGGCATCGGGCCGAAATCGAGAGCCGTGGGGTGGTTGTGTCGGCGCGCGTGCTGCGGGAAGCGGTCCGGCGTGACATAGAGGCACTGTTCAACACGGAGCGCTTCGAATCCATGCCGCTCCTGTCGGACCTGGAACGCGAACAGGCACCCGACACTCCCGCCTCACTTGACGACTTCCCCGAGGTGCGGCGCAGCGTGGTCAACTATGGCGTGCCCTCCTTCTCCGGCCGATCGTCGCGCGATTTCGACCGCGATGTGCTCGCGCGCGAGATCAGGGCCATCCTCGCCACCTTCGAGCCCCGCCTCAGGGACAGCGAGACAAAGGTCATGGTCAACCTCGGAGACAAGACAGGCCTCAAGATCGAGATCGAGGCGGTGCTGATCATGACGCCTACGCCGGAGAGATTGCGGTTGCGCACGACCATCAACCTCGAAAACGGCCTGGCGCGAACCGACTTCAAGGAAGCCTGA
PROTEIN sequence
Length: 239
MAAITSNPRAKREAVQPSLWDRLVNDLPGLGSEIDSLANTLREELGAERLEALLAGGTRVIDADTDLSPEQKRRLNRLMAQNRHRAEIESRGVVVSARVLREAVRRDIEALFNTERFESMPLLSDLEREQAPDTPASLDDFPEVRRSVVNYGVPSFSGRSSRDFDRDVLAREIRAILATFEPRLRDSETKVMVNLGDKTGLKIEIEAVLIMTPTPERLRLRTTINLENGLARTDFKEA*