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cn_combo_scaffold_2504_28

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(34928..35377)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000375C0A9 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 148.0
  • Bit_score: 243
  • Evalue 1.70e-61
type VI secretion system effector Hcp1 family protein similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 148.0
  • Bit_score: 245
  • Evalue 1.20e-62
Type VI secretion system effector Hcp1 family protein {ECO:0000313|EMBL:AJC83155.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 148.0
  • Bit_score: 245
  • Evalue 6.20e-62

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGAAGATCGACGGATTTCTGAAGGTTCCGGACATCACGGGGCCGAGCGAGCGCGACGGTCACGAGGAAGAGATCGAAATTCACGGTGTCGAGTTCAACATGGTTGCGCCGCACGATCCCAACTCGCTTTCTCGGCGGGGCCGGGTGGCGCTCGGCGTGATCGTGTTCATCAAGCACTACGACAAGTCCTCGCCCTACCTGAAGCAGGCGCTCTTCCAGAACAAGAAGCTCGACGACGTGAAGTTCTCGGCCCGCCGCACCATCGAGGAAGCGAGCAGCGACTATCTCGTGATCGAGCTGACCGACGCTTCGGTGATCAGCTACGACATGAAGCCGAGCGAGGAAGAACCCGACCTGATCGAGGAGCGCGTGGGCTTCGCCTACAAGAAGATCAAGTTCGTCTACGACGACAGCGACGAGGTGGAAATGGACGTGCATGTCGGTGTCTGA
PROTEIN sequence
Length: 150
MKIDGFLKVPDITGPSERDGHEEEIEIHGVEFNMVAPHDPNSLSRRGRVALGVIVFIKHYDKSSPYLKQALFQNKKLDDVKFSARRTIEEASSDYLVIELTDASVISYDMKPSEEEPDLIEERVGFAYKKIKFVYDDSDEVEMDVHVGV*