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cn_combo_scaffold_2504_30

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(36910..37449)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003748F4C similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 179.0
  • Bit_score: 324
  • Evalue 9.00e-86
Uncharacterized protein {ECO:0000313|EMBL:CCV06237.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 178.0
  • Bit_score: 313
  • Evalue 1.70e-82
type VI secretion protein, vc_a0107 family similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 177.0
  • Bit_score: 310
  • Evalue 3.80e-82

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Taxonomy

Mesorhizobium metallidurans → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCCAGCCGAAAGCAAAGCAAAGGTCATCGAGCGCAATCGCGCTCCGCGCGTGCAGATCGCCTATGACGTCGAGACCTATGGCAGTCCGACCACGATCGAACTGCCGTTCGTCATGGGTGTGATGGCCGACCTCTCGGGCGCCTCGCAGACCAGGGAAGCGATGAAGACGGTCCAGGACCGCACCTTCGTCGAAACCGACGCCAACCGGTTTCCCAAGTTCATGGAAGCGCTCGGGCCTCGGGTCAAGGCACGGGTGAAGAACACGCTGCCGGTCGCCGAGGGCCAGGAGGGCGACGAGGAACTCGCCGTCGACCTGACCTTCTCGAGCATGGGCGACTTCGCGCCGGACAAGATCGCCGAACAGGTCCCGCAGTTAGCGGAAATTCTTAAGATGCGCCGCCAACTCGTTGAATTACTGGGCTTCATGGATGGTCGCATAGATGCCGAAAAGCGCATCGCACAGCTTCTGAACAACGAGCCGCTGCTTGCGCAGATCGCCGACAAGACGCTGTCCGGCGACGACAAGGTCGAGGGTTGA
PROTEIN sequence
Length: 180
MPAESKAKVIERNRAPRVQIAYDVETYGSPTTIELPFVMGVMADLSGASQTREAMKTVQDRTFVETDANRFPKFMEALGPRVKARVKNTLPVAEGQEGDEELAVDLTFSSMGDFAPDKIAEQVPQLAEILKMRRQLVELLGFMDGRIDAEKRIAQLLNNEPLLAQIADKTLSGDDKVEG*