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cn_combo_scaffold_2504_31

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(37456..38616)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF27D2 related cluster n=1 Tax=unknown RepID=UPI0003CF27D2 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 395.0
  • Bit_score: 544
  • Evalue 1.20e-151
Type VI secretion protein {ECO:0000313|EMBL:ESY73583.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 391.0
  • Bit_score: 542
  • Evalue 4.90e-151
type VI secretion-associated protein, impa family similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 392.0
  • Bit_score: 534
  • Evalue 2.00e-149

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
GTGGTTGATCTTGCTCTCTGGCTCAGCCCCTTGGACGGTGCGAATCCGTCGGGAGAAGATTTGCGCAACGATCCCCGCTTCCACGAGCTGGAGCGGCTGACCGAGGCCCAGGTCGAAGTCGTCCACGACGAGCGCAACCGGCCGACTTCCCAGGTGAGCATACCCGTCGACTGGGCTGCCGTCCTTGAAGTGGCAGAAGAACTCCGGGCCCATGGCCGGGACCTGCGCCTGCTCGTCATCGTCACGCGGGCGCTTGCCAGCGAGCGAGGCTTTGCAGGCCTAGCCGAGGGGCTCTCGCTGATTGCGCGGACATTCGAGGAGCATTGGGAGACGATGCACCCGGCGCTGCGGCAGGCCGCCACGCCGCGCGACGCCGCGCTGCGTCGCGTCAACGCGCTGCTCGACCTGCAGAACGCGCAAGAAGGCTTGCTTGGAAACCTGCGCCGGATGACGGTTTTCGCGCCACGCGGGGTCGGCCCGGTCAGCGGCCGCGACCTGGAGCAAGGCGCGCTCGACGACCGGGTGATGCTGCAGGAGGCGGCGCAAGGGCTGAACAGCGCGGAGCGTGCGACACTGTCGAGTGCGCACGAACAACTGCTCACCAAGGTTCGCAGCGGATGTGCCGCCCAGAACGACCAGGCACCGCAGGACATGGCCGCGCTCCTGGCCGATCTGCGCGCCTCGATCGCAGCCCTTGCCGCGCTCGACGCCGCGTTCAACGCCCGCCTCGACGGTTCCGGACCTGCGGTACCGATGCTGACGCGCTTCCTCGACAGGGTGGCGTCGACGCTGGAGCGGAGTTCGGGTGGCCGGGCCGCGCCCAATGGCGTGGACAGGGCCGAGCCGGCAGCCGTGGTTTCGTCGGCACCGGCAGTAAACGGCCACGATCCGGCACCGGCGCCTGCGCAAGGTTCGGCGGCCCTGCCCGACCGCATCAACTCGCGCGACGACGTGGTCAGATGCCTGGACCTCGTCATCGCCTTCTACGACCGCACCGAGCCGTCGAGCCCGATCCCGCACCTGGCACGGCGGGTACGCCGGATGGTGCCCATGGATTTTGTCGAACTGATGGAAGATCTCGCCCCCTCCGGCCTGAAGGAGTTCCGGCTTCTGGCCGGGGTTCCCGACGCGAAGAAGACGCCCCAGAAGGATGAAAGGTAG
PROTEIN sequence
Length: 387
VVDLALWLSPLDGANPSGEDLRNDPRFHELERLTEAQVEVVHDERNRPTSQVSIPVDWAAVLEVAEELRAHGRDLRLLVIVTRALASERGFAGLAEGLSLIARTFEEHWETMHPALRQAATPRDAALRRVNALLDLQNAQEGLLGNLRRMTVFAPRGVGPVSGRDLEQGALDDRVMLQEAAQGLNSAERATLSSAHEQLLTKVRSGCAAQNDQAPQDMAALLADLRASIAALAALDAAFNARLDGSGPAVPMLTRFLDRVASTLERSSGGRAAPNGVDRAEPAAVVSSAPAVNGHDPAPAPAQGSAALPDRINSRDDVVRCLDLVIAFYDRTEPSSPIPHLARRVRRMVPMDFVELMEDLAPSGLKEFRLLAGVPDAKKTPQKDER*