ggKbase home page

cn_combo_scaffold_2604_3

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2244..2879)

Top 3 Functional Annotations

Value Algorithm Source
ribosome maturation factor RimP n=1 Tax=Hoeflea sp. 108 RepID=UPI00037682D3 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 211.0
  • Bit_score: 373
  • Evalue 1.50e-100
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 208.0
  • Bit_score: 347
  • Evalue 1.60e-92
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 208.0
  • Bit_score: 332
  • Evalue 6.40e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGAGCGAAAACGCAGTCGAACATGAAGGCGACGACCGCATCATCCGCGACACCGGCATCGATGCCCGCATCGCGCTGATCATCCAGCCGGTGCTCCGTGCGATCGGCTTCCGCCTCGTGCGCGTGCGGCTGACCGGCCAGAACGGCCTGACGCTGCAGATCATGGCCGAGCGCGAAGACGGGACCATGACGGTCGAGGATTGCGAAGAGGTGAGCCGCGCGGTCTCGCCCGCACTCGACGTCGAGGATCCGATCGAAAAGGCGTATCATCTCGAAGTTTCGTCGCCGGGCATCGACCGGCCGCTGGTGCGCAAGTCGGATTTCACGAACTGGATCGGCCATCTCGTGAAGATGGAGACCTCGGTCCTTGTCACCGACCGCAAGCGCTTCCGCGGCAAGATCACCGAGGTCGACGACGAGGGCATCCTGGTCCAGCGCGACCAGGCCGCCTATGGCGAAGAGCCTACGGTGCGCGTGCCCTTCGAGGCGATGGCCGAGGCGCGGCTGATCCTGACCGACGACCTGATCCGCGACGCCTTGAGCAAGGACAACAGGGCCCGCAAGGAAGCCAAGAAGCGTCACGGCGATGAAGCCGACGACGCCGCCGAAGACGAAGAAACCGAAACGGAAGACTGA
PROTEIN sequence
Length: 212
MSENAVEHEGDDRIIRDTGIDARIALIIQPVLRAIGFRLVRVRLTGQNGLTLQIMAEREDGTMTVEDCEEVSRAVSPALDVEDPIEKAYHLEVSSPGIDRPLVRKSDFTNWIGHLVKMETSVLVTDRKRFRGKITEVDDEGILVQRDQAAYGEEPTVRVPFEAMAEARLILTDDLIRDALSKDNRARKEAKKRHGDEADDAAEDEETETED*