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cn_combo_scaffold_2604

Alias: MES20_67

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_2604_1
Mesorhizobium sp. L103C120A0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..605)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E666C
Uncharacterized protein {ECO:0000313|EMBL:ESZ63437.1}; TaxID=1287086 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_2604_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(602..2191)
DNA (1590bp) protein (530aa)
transcription elongation factor NusA n=1 Tax=Hoeflea sp. 108 RepID=UPI000362CE6B
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizo
transcription termination factor NusA
cn_combo_scaffold_2604_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2244..2879)
DNA (636bp) protein (212aa)
ribosome maturation factor RimP n=1 Tax=Hoeflea sp. 108 RepID=UPI00037682D3
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae;
hypothetical protein
cn_combo_scaffold_2604_4
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3152..3316
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000371694D
Uncharacterized protein {ECO:0000313|EMBL:CCV03240.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
cn_combo_scaffold_2604_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3623..5179)
DNA (1557bp) protein (519aa)
tripartite tricarboxylate transporter TctA n=1 Tax=Hoeflea sp. 108 RepID=UPI00037C854C
Putative uncharacterized protein {ECO:0000313|EMBL:EHK59031.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
hypothetical protein rbh
cn_combo_scaffold_2604_6
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5207..5692)
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036648FD
Putative tricarboxylic transport membrane protein {ECO:0000313|EMBL:EHK59032.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;"
putative tricarboxylic transport membrane protein
cn_combo_scaffold_2604_7
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5689..6633)
DNA (945bp) protein (315aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A6E91
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:EZQ17037.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudo
hypothetical protein rbh
cn_combo_scaffold_2604_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6949..8013)
DNA (1065bp) protein (355aa)
iron ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00037369AB
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:EHK59034.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" so
ABC transporter, substrate binding protein (iron)
cn_combo_scaffold_2604_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8130..8804
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C53F0
Two component response regulator {ECO:0000313|EMBL:EHK59035.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhiz
two component transcriptional regulator
cn_combo_scaffold_2604_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8804..10192
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; M
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368BA83
two-component sensor histidine kinase
cn_combo_scaffold_2604_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10328..11041
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EED4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81228.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cn_combo_scaffold_2604_12
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11117..11794)
DNA (678bp) protein (226aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC68250.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
cn_combo_scaffold_2604_13
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12051..12443
DNA (393bp) protein (131aa)
RNA polymerase, sigma-24 subunit, RpoE n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BJ5_MESSB
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:ABG65230.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Che
cn_combo_scaffold_2604_14
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12513..15044)
DNA (2532bp) protein (844aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F27F8
Protein-export membrane protein, SecD/SecF family {ECO:0000313|EMBL:EJN04007.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriacea
secD; export membrane protein SecD
cn_combo_scaffold_2604_15
Hoeflea sp. 108, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15141..15554)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B22CF
cn_combo_scaffold_2604_16
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15677..16408)
DNA (732bp) protein (244aa)
Transcriptional regulator, IclR family n=1 Tax=Citreicella sp. SE45 RepID=D0DCP1_9RHOB
Transcriptional regulator, IclR family {ECO:0000313|EMBL:EEX12232.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Cit
IclR family transcriptional regulator
cn_combo_scaffold_2604_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16571..17326
DNA (756bp) protein (252aa)
ABC transporter related protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HXM3_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EHK54500.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizo
ABC transporter
cn_combo_scaffold_2604_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17319..18056
DNA (738bp) protein (246aa)
ABC transporter related n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q213D7_RHOPB
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABD88499.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
cn_combo_scaffold_2604_19
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18088..19293
DNA (1206bp) protein (402aa)
ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000305C02F
ABC transporter permease {ECO:0000313|EMBL:KFG67279.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata
extracellular ligand-binding receptor
cn_combo_scaffold_2604_20
bacterium YEK0313, Bacteria

Not on your lists

19333..20244
DNA (912bp) protein (304aa)
Inner-membrane translocator n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBR7_METNO
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:CEJ15315.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
inner-membrane translocator
cn_combo_scaffold_2604_21
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20246..21202
DNA (957bp) protein (319aa)
UPI0003CFE05B related cluster n=1 Tax=unknown RepID=UPI0003CFE05B
Inner-membrane translocator {ECO:0000313|EMBL:KFB10002.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireduc
inner-membrane translocator
Displaying 21 items

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