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cn_combo_scaffold_3282_16

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(10297..11145)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F574A similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 282.0
  • Bit_score: 530
  • Evalue 7.60e-148
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 270.0
  • Bit_score: 500
  • Evalue 2.00e-138
PP-loop domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 282.0
  • Bit_score: 487
  • Evalue 2.10e-135

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGGCATTCACGAACAGGACGCTTTGGTCGAGCCGGAAACCGCATTCCCGCTCTACCGCGACGCGCCGTCTTCCGTGGAATTCAACAAGCTGCGCAAGCGGCTGCTGCGTCTGACACGCCAGACGATCGAGGACTACGCCATGGTGAAGCCCGGCGAACGCTGGCTCGTGGCGCTGTCCGGCGGCAAGGATTCCTACGGCCTGCTCGCCGTCCTCCTCGATCTCAAATGGCGCGGCCTGCTGCCGGTTGAACTGCTGGCCTGCAACCTCGACCAGGGGCAGCCGAATTTCCCCAAGAACGTCCTGCCCGACTACCTGAACGCCAACGGCATTCCGCATCGCATCGAGTACCGCGACACCTATTCTGTCGTCACCGACAAGCTCTCCGAGGGCAGCACCTACTGCTCGCTATGCTCGCGGCTCCGGCGCGGCCACCTCTACCGCATCGCACGCGAGGAGGGCTGCTCGTCGCTGGTGCTCGGCCATCATCGCGAGGACATCCTCGAAACCTTTTTCATGAACCTCTTCCACGGTGGTCGCCTCGCCGCCATGCCGCCAAAGCTGGTGAACGACGAAGGCGACGTCATGGTGCTGAGGCCGCTGAGCCTCTGCGCCGAGGCCGATCTGGCCAAATTCGCGGACGCCATGAAGTTCCCGATCATCCCCTGCGACCTGTGCGGCAGCCAGGAGGGGCTCCAGCGCAACGCCATGAAGGCGATGCTGGACGACATGGAAAAGCGCATGCCCGGCCGCAAGGACACCATGATCCGTGCGCTCGCGAACGTGCGGCCGTCGCATATGCTCGACCGCAAGCTTTTCGACTTCGCGGGTCTGTCCCTGTCTCAGTGA
PROTEIN sequence
Length: 283
MGIHEQDALVEPETAFPLYRDAPSSVEFNKLRKRLLRLTRQTIEDYAMVKPGERWLVALSGGKDSYGLLAVLLDLKWRGLLPVELLACNLDQGQPNFPKNVLPDYLNANGIPHRIEYRDTYSVVTDKLSEGSTYCSLCSRLRRGHLYRIAREEGCSSLVLGHHREDILETFFMNLFHGGRLAAMPPKLVNDEGDVMVLRPLSLCAEADLAKFADAMKFPIIPCDLCGSQEGLQRNAMKAMLDDMEKRMPGRKDTMIRALANVRPSHMLDRKLFDFAGLSLSQ*