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cn_combo_scaffold_3282_17

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(11313..11930)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Hoeflea sp. 108 RepID=UPI000370349A similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 205.0
  • Bit_score: 410
  • Evalue 1.40e-111
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 205.0
  • Bit_score: 401
  • Evalue 7.10e-109
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 205.0
  • Bit_score: 394
  • Evalue 2.30e-107

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGAGCAAGCGCGAATCCGCCAAGTACAAACTCGACCGCCGTCTTGGCGAGAACATCTGGGGCCGCCCGAAGTCCCCGGTCAACAAGCGTGAATACGGCCCCGGCCAGCACGGCCAGCGCCGCAAGGGCAAGCTCTCGGACTTCGGTCTGCAGCTGCGCGCCAAGCAGAAGCTGAAGGGTCACTACGGTGACGTTTCCGAGAAGCAGTTCCGCAAGACCTACGAAGAGGCCAACCGCCGCAAGGGCGACACCTCGGAGAACCTGATCGGCCTGCTCGAGTCGCGTCTGGATGCGGTCGTCTACCGCGCCAAGTTCGTGCCGACCATTTTCGCGGCCCGTCAGTTCGTCAACCACGGCCACGTCAACGTCAACGGCAAGCGCACCAACATCTCGTCCTACCGCTGCAAGGCTGGCGACGTGATCGAGGTTCGCGAGAAGTCGAAGCAGCTGGTCATGGTGCTCGAGGCCGTTGCTCTCGCCGAGCGCGACGTTCCGGACTACATCGAAGTCGACCACAACAAGATGGTCGCGACCTTTGCTCGCGTTCCCGGCCTGTCGGACGTTCCGTTCGCCGTCCAGATGGAACCGAACCTCGTCGTCGAATTCTATTCGCGCTAA
PROTEIN sequence
Length: 206
MSKRESAKYKLDRRLGENIWGRPKSPVNKREYGPGQHGQRRKGKLSDFGLQLRAKQKLKGHYGDVSEKQFRKTYEEANRRKGDTSENLIGLLESRLDAVVYRAKFVPTIFAARQFVNHGHVNVNGKRTNISSYRCKAGDVIEVREKSKQLVMVLEAVALAERDVPDYIEVDHNKMVATFARVPGLSDVPFAVQMEPNLVVEFYSR*