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cn_combo_scaffold_7866_1

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(50..772)

Top 3 Functional Annotations

Value Algorithm Source
rncS; ribonuclease III (EC:3.1.26.3) similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 232.0
  • Bit_score: 361
  • Evalue 1.50e-97
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 232.0
  • Bit_score: 360
  • Evalue 1.60e-96
ribonuclease III n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B8099 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 240.0
  • Bit_score: 429
  • Evalue 2.70e-117

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGCCTGCGAAGCGGCTCACAGCCACCGAACTAGCCGATGCGCTGCAACTCCGCACCGGCCATGTCTTTCGCGACCACAAGCGCCTGCAGCGTGCGCTGACACATGGCAGCGCGCGCAGTGCGAATGCGGGCGTCGACTACGAGCGCTTCGAGTTCCTGGGCGACCGGGTGCTCGGCCTCGCCGTCGCCGACATGCTGCTCGAGGCGTTCCCCGAGGCTCCGGAGGGCGAACTGTCGGTCCGCCTCAATGCGCTGGTCAACGCCGAGGCGCTGGCCGAGATCGCCGACGTGATCGGTCTTGCCGAACTGATCCGCGCCGGCTCGGAAGTGCGCAACCTCGCCGAGCGCAAGCGTGTCAACCTGCGTGCCGATGCGCTTGAATCGCTGATCGCCGTGATCTATCTCGACGGCGGGCTCGATGCGGCCAAGCGCTTCATCCACAAATATTGGAAGCCGCGCGCGCAGGCCGTGGGTGCCGCCCGCCGCGATCCCAAGACCGAACTGCAGGAATGGGCGCACCAGGCCGCGAGTGCCGTGCCCGCCTACCAGATCGAGAGCCGCGTCGGCCCCGACCACGACCCCGTCTTCACCGTCAGCGTGCGGGTGGGGAATTATTTGCCTGCCACCGGCACCGGCCGCTCCAAGCGCGAGGCCGAACAGAATGCCGCCGCCGCCGTGCTGTTGCGCGAGGGCGTGTGGAAGAACGAGGAGACCGCATCGTGA
PROTEIN sequence
Length: 241
MPAKRLTATELADALQLRTGHVFRDHKRLQRALTHGSARSANAGVDYERFEFLGDRVLGLAVADMLLEAFPEAPEGELSVRLNALVNAEALAEIADVIGLAELIRAGSEVRNLAERKRVNLRADALESLIAVIYLDGGLDAAKRFIHKYWKPRAQAVGAARRDPKTELQEWAHQAASAVPAYQIESRVGPDHDPVFTVSVRVGNYLPATGTGRSKREAEQNAAAAVLLREGVWKNEETAS*