ggKbase home page

cn_combo_scaffold_7866

Alias: MES20_129

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_7866_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50..772)
DNA (723bp) protein (241aa)
rncS; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
ribonuclease III n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B8099
cn_combo_scaffold_7866_2
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(775..1521)
DNA (747bp) protein (249aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae
signal peptidase n=1 Tax=Hoeflea sp. 108 RepID=UPI000370458B
signal peptidase I
cn_combo_scaffold_7866_3
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1614..2015)
DNA (402bp) protein (134aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
4''''-phosphopantetheinyl transferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037658AE
holo-(acyl-carrier-protein) synthase
cn_combo_scaffold_7866_4
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2027..2605)
DNA (579bp) protein (193aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F1968
cn_combo_scaffold_7866_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2646..4883)
DNA (2238bp) protein (746aa)
GTP pyrophosphokinase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003609984
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:ETA72137.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
GTP pyrophosphokinase
cn_combo_scaffold_7866_6
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5046..5438)
DNA (393bp) protein (131aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7C9_MESOW
DNA-directed RNA polymerase subunit omega
cn_combo_scaffold_7866_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5718..6299
DNA (582bp) protein (194aa)
UPI0003CE6004 related cluster n=1 Tax=unknown RepID=UPI0003CE6004
Uncharacterized protein {ECO:0000313|EMBL:ESW83113.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_7866_8
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6299..6964
DNA (666bp) protein (222aa)
SPO1 DNA polymerase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D1CC7
Uracil-DNA glycosylase superfamily protein {ECO:0000313|EMBL:CDX22565.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source
hypothetical protein
cn_combo_scaffold_7866_9
unknown

Not on your lists

comp(7198..7416)
DNA (219bp) protein (73aa)

This feature has no annotations

cn_combo_scaffold_7866_10
unknown

Not on your lists

comp(7544..7762)
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying 10 items

View Taxonomy