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cn_combo_scaffold_7866_6

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5046..5438)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 133.0
  • Bit_score: 230
  • Evalue 1.40e-57
DNA-directed RNA polymerase subunit omega n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y7C9_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 133.0
  • Bit_score: 230
  • Evalue 9.90e-58
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 133.0
  • Bit_score: 230
  • Evalue 2.80e-58

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Taxonomy

Mesorhizobium sp. LNHC232B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCCCGCGTAACCGTTGAAGACTGCATTGATAAGGTCGACAACCGCTTCGAGCTGGTGCTTCTCGCCGGCCACCGCGCCCGCCTGATCTCGCAGGGCGCGCAGATCACCGTTCCGCGCGACAACGACAAGAACCCCGTCGTGGCGCTGCGCGAGATCGCCGACGAGACGCTGTCGCCCGACGATCTCAAGGAAGACCTGATCCACTCGCTGCAGAAGCATGTCGAGGTCGACGAGCCGGAGGCGGAAGCTCCCGAGGCGGCCGACCAGACCGTCGCTGCCATGGACACCGAAGAGCCGGAAGAGAACATCACCTTCGACCGCATGACCGAAGAGGACCTTCTGGCCGGCATCGAGGGCCTGGTTGCTCCCGAGAAGAGCGACGACTACTGA
PROTEIN sequence
Length: 131
MARVTVEDCIDKVDNRFELVLLAGHRARLISQGAQITVPRDNDKNPVVALREIADETLSPDDLKEDLIHSLQKHVEVDEPEAEAPEAADQTVAAMDTEEPEENITFDRMTEEDLLAGIEGLVAPEKSDDY*