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cn_combo_scaffold_1568_46

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 49863..50474

Top 3 Functional Annotations

Value Algorithm Source
nitrite reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F886F similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 203.0
  • Bit_score: 392
  • Evalue 3.10e-106
Nitrite reductase, copper-containing {ECO:0000313|EMBL:EHK53213.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 203.0
  • Bit_score: 361
  • Evalue 8.10e-97
nitrite reductase, copper-containing similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 203.0
  • Bit_score: 358
  • Evalue 1.10e-96

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Notes

truncated translation due to frameshift, possible misassembly. Rose Kantor (10/14/14)

Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGATCCCCTGGCATGTCGTGTCGGGCATGAACGGCGCCGTCATGGTGCTGCCACGCGACGGCCTGAAGGACGAGGCGGGCAAGGCGCTGAAGTACGACCGCATCTTCTACATCGGCGAGCATGACCTCTATGTTCCGCGCGACGAGAACGGCAAGTTCAAGAAGTTCGCATCGCTCGGCGAGAGCTACGACGAGACGCTGCAGGTGATGCGCGGCCTGATCCCGAGCCACGTCGTCTTCAACGGCAAGGTCGGTTCGCTGACGGGCGACAACGCGCTCAAGGCGAAGGTTGGCGAAACTGTGCTGATCATCCACGCCCAGGCCAACCGGGACACGCGTCCGCACCTGATCGGCGGCCACGGCGACCATGTCTGGGAAGAAGGCAAGTTCGTCAACGCGCCGGCCAAGGACCTGGAGACCTGGTTCATCCGCGGCGGATCGGCCGGAGCTGCGCTCTACACCTTCCTGCAGCCGGGCCTGTACGCCTACGTCAACCACAACCTCATCGAGGCCGCTGAACTCGGCGCAACCGCGCACGTCACGGTCGAGGGCGAGTGGAATGACGACCTGATGAAGCAGGTTCAGGCCCCCGGCCCGATCCCGACCAACTGA
PROTEIN sequence
Length: 204
MIPWHVVSGMNGAVMVLPRDGLKDEAGKALKYDRIFYIGEHDLYVPRDENGKFKKFASLGESYDETLQVMRGLIPSHVVFNGKVGSLTGDNALKAKVGETVLIIHAQANRDTRPHLIGGHGDHVWEEGKFVNAPAKDLETWFIRGGSAGAALYTFLQPGLYAYVNHNLIEAAELGATAHVTVEGEWNDDLMKQVQAPGPIPTN*