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cn_combo_scaffold_1568

Alias: ALPHA_220

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Displaying items 31-60 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1568_31
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36179..37681)
DNA (1503bp) protein (501aa)
3-octaprenyl-4hydroxybenzoate decarboxylase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:ABG61263.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABG61263.1};; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobact
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV6_MESSB
cn_combo_scaffold_1568_32
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37844..38272
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003799B5D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61264.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp.
cn_combo_scaffold_1568_33
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38377..38925
DNA (549bp) protein (183aa)
Putative lipid carrier protein-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV4_MESSB
Putative lipid carrier protein-like protein {ECO:0000313|EMBL:CDX53579.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
putative lipid carrier protein-like
cn_combo_scaffold_1568_34
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38922..39917
DNA (996bp) protein (332aa)
Peptidase U32 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11MV3_MESSB
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ABG61266.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativo
cn_combo_scaffold_1568_35
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39922..40821
DNA (900bp) protein (300aa)
protease n=1 Tax=Rhizobium loti RepID=UPI0003626310
protease
Protease {ECO:0000313|EMBL:AGK56767.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES
cn_combo_scaffold_1568_36
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40843..41127)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B88C7
amylo-alpha-1,6-glucosidase family
Amylo-alpha-1,6-glucosidase family {ECO:0000313|EMBL:AHK46763.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.
cn_combo_scaffold_1568_37
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41342..42694
DNA (1353bp) protein (451aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobi
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000360EB92
hemN; HemN coproporphyrinogen III oxidase rbh
cn_combo_scaffold_1568_38
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42806..44704)
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000378723E
Nitric oxide reductase activation protein {ECO:0000313|EMBL:EYR78633.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella s
norD; NorD protein required for nitric oxide reductase (Nor) activity rbh
cn_combo_scaffold_1568_39
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44714..45526)
DNA (813bp) protein (271aa)
ATPase AAA n=1 Tax=Hoeflea sp. 108 RepID=UPI0003717938
MoxR-like ATPase {ECO:0000313|EMBL:EYR78632.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
norQ; NorQ protein required for nitric oxide reductase activity
cn_combo_scaffold_1568_40
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45600..46946)
DNA (1347bp) protein (449aa)
Nitric oxide reductase subunit B {ECO:0000313|EMBL:EYR78631.1}; EC=1.7.2.5 {ECO:0000313|EMBL:EYR78631.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiace
nitric oxide reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003632A2D
norB; nitric-oxide reductase subunit B
cn_combo_scaffold_1568_41
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46970..47422)
DNA (453bp) protein (151aa)
cytochrome C n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E9AAF
cytochrome c class I
Cytochrome c class I {ECO:0000313|EMBL:ABR64887.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source
cn_combo_scaffold_1568_42
Hoeflea sp. 108, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47576..47848)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000378C62F
cn_combo_scaffold_1568_43
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47854..48408)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003739164
NorE accessory protein for nitric oxide reductase {ECO:0000313|EMBL:KDP75702.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer g
Heme/copper-type cytochrome/quinol oxidase, subunit 3
cn_combo_scaffold_1568_44
Rhizobium sp. UR51a, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48519..48674
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000372FF44
Uncharacterized protein {ECO:0000313|EMBL:KIV60724.1}; TaxID=1604021 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
conserved hypothetical protein; putative signal peptide
cn_combo_scaffold_1568_45
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48693..49136
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000373793F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD46116.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
Hemerythrin domain Rose Kantor (10/14/14)
cn_combo_scaffold_1568_46
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49863..50474
DNA (612bp) protein (204aa)
nitrite reductase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F886F
Nitrite reductase, copper-containing {ECO:0000313|EMBL:EHK53213.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Meso
nitrite reductase, copper-containing
truncated translation due to frameshift, possible misassembly. Rose Kantor (10/14/14)
cn_combo_scaffold_1568_47
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50553..51425
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037940F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG61242.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source=
cn_combo_scaffold_1568_48
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51513..52718)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037B53A4
NnrS
NnrS {ECO:0000313|EMBL:ABG61245.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
cn_combo_scaffold_1568_49
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52803..53246)
DNA (444bp) protein (148aa)
pseudoazurin n=1 Tax=Hoeflea sp. 108 RepID=UPI00037116E6
Pseudoazurin {ECO:0000313|EMBL:EXL02339.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
pseudoazurin
cn_combo_scaffold_1568_50
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53396..54100
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375DC4C
Crp/FNR family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABG61247.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="
cn_combo_scaffold_1568_51
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54166..54366)
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368B72A
Uncharacterized protein {ECO:0000313|EMBL:CDX20714.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
cn_combo_scaffold_1568_52
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54462..55178)
DNA (717bp) protein (239aa)
UPI0003D001C3 related cluster n=1 Tax=unknown RepID=UPI0003D001C3
napC; NapC membrane protein, e-donor to periplasmic nitrate reductase rbh
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" sour
cn_combo_scaffold_1568_53
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55183..55656)
DNA (474bp) protein (158aa)
Periplasmic nitrate reductase, electron transfer subunit n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1E5_9RHIZ
Periplasmic nitrate reductase, electron transfer subunit {ECO:0000256|PIRNR:PIRNR006105}; Diheme cytochrome c NapB {ECO:0000256|PIRNR:PIRNR006105}; TaxID=1107882 species="Bacteria; Proteobacteria; Alp
nitrate reductase cytochrome c-type subunit NapB
cn_combo_scaffold_1568_54
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55653..58157)
DNA (2505bp) protein (835aa)
Nitrate reductase {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461}; EC=1.7.99.4 {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461};; Flags: Precursor;; TaxID=1107882 spec
napA; nitrate reductase catalytic subunit NapA (EC:1.7.99.4) rbh
Nitrate reductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1E4_9RHIZ
cn_combo_scaffold_1568_55
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58154..58420)
DNA (267bp) protein (89aa)
NapD family protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1E3_9RHIZ
napD; NapD component of periplasmic nitrate reductase
NapD component of periplasmic nitrate reductase {ECO:0000313|EMBL:AHK45445.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer gr
cn_combo_scaffold_1568_56
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58413..58910)
DNA (498bp) protein (166aa)
Ferredoxin-type protein NapF n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I1E2_9RHIZ
Ferredoxin-type protein NapF {ECO:0000313|EMBL:EHK53208.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu
napF; NapF Ferredoxin component of periplasmic nitrate reductase
cn_combo_scaffold_1568_57
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58914..59105)
DNA (192bp) protein (64aa)
UPI0003CFA618 related cluster n=1 Tax=unknown RepID=UPI0003CFA618
Nitrate reductase {ECO:0000313|EMBL:ESZ20081.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C0
napE; NapE component of periplasmic nitrate reductase NapE
cn_combo_scaffold_1568_58
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59302..60828)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036208AD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD53834.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (str
cn_combo_scaffold_1568_59
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60890..61348)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000310D31E
Metal-binding protein {ECO:0000313|EMBL:EXL07887.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvi
putative conserved periplasmic protein
cn_combo_scaffold_1568_60
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61531..61983)
DNA (453bp) protein (151aa)
Transcriptional regulator, SARP family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y986_MESOW
SARP family transcriptional regulator
Transcriptional activator domain protein {ECO:0000313|EMBL:CDX11096.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
Displaying items 31-60 of 60 in total

View Taxonomy