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cn_combo_scaffold_1568_60

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(61531..61983)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, SARP family n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y986_MESOW similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 150.0
  • Bit_score: 186
  • Evalue 1.90e-44
SARP family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 150.0
  • Bit_score: 186
  • Evalue 5.30e-45
Transcriptional activator domain protein {ECO:0000313|EMBL:CDX11096.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 150.0
  • Bit_score: 186
  • Evalue 2.00e-44

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
GAGGTGCGGTACGCGCTCGTACTCAATCCGCGCTTTCCCAACGCCCATGGCGACCTTTCCGAGCTCTACGCGTTTCTCGGGCAGACCGAAGAAGCGATCGCCGAGGCGAGGGAGGCCATTCGTCTGAGTTCGCGTGATCCCGCGGATTTCTGGCGCTACTACAGCCTCTCTGTTGCCCAGTTCGGCGCAGGCGACGACGCGGGCGCGCTGGAGACCGCCCGCCACGTCATGCGTACCAAGCCTGACTTTGCGCGGGGCGCGGTTTTCTGGGCGGCGGCAGCCGCGGCCGTGGGCAATGCCGAGGAAGCCTTGCGCGCCGTGGAGGTTTGCCTGGAACAATTGCCCGAACTCCGATTAGGCAACGTCTCTCCGGGTTTCGTGCCTCGCTATGTCCAGGAGCAGCAGCACCAGCGCTTCCTCGCAATGCTGCGCAAGGCCGGGCTGCCGGAATAG
PROTEIN sequence
Length: 151
EVRYALVLNPRFPNAHGDLSELYAFLGQTEEAIAEAREAIRLSSRDPADFWRYYSLSVAQFGAGDDAGALETARHVMRTKPDFARGAVFWAAAAAAVGNAEEALRAVEVCLEQLPELRLGNVSPGFVPRYVQEQQHQRFLAMLRKAGLPE*