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cn_combo_scaffold_1623

Alias: MIC18_139

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1623_1
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15..1079)
DNA (1065bp) protein (355aa)
ribose/xylose/arabinose/galactoside ABC transporter permease (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Actinobaculum schaalii FB123-CNA-2 RepID=S2VMP1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD27285.1}; TaxID=883067 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii FB123-CNA-2.;"
cn_combo_scaffold_1623_2
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1202..2179
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034733BA
Transcriptional regulator {ECO:0000313|EMBL:EYT60499.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
transcriptional regulator
cn_combo_scaffold_1623_3
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2176..2796
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349A601
Uncharacterized protein {ECO:0000313|EMBL:EYT60906.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
ribulose-phosphate 3-epimerase
cn_combo_scaffold_1623_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2797..3702)
DNA (906bp) protein (302aa)
fructokinase (EC:2.7.1.4)
sugar kinase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B3BE70
Carbohydrate kinase {ECO:0000313|EMBL:KIC59351.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
cn_combo_scaffold_1623_5
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3699..4220)
DNA (522bp) protein (174aa)
Putative lactoylglutathione lyase n=1 Tax=Clostridium sp. D5 RepID=F0YT77_9CLOT
Putative lactoylglutathione lyase {ECO:0000313|EMBL:EGB94097.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
cn_combo_scaffold_1623_6
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4253..5275)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI000348D67A
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEJ44805.1}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoca
cn_combo_scaffold_1623_7
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5268..6353)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KSK5_9MICO
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIE81933.1}; TaxID=59505 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii.;"
cn_combo_scaffold_1623_8
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6350..7423)
DNA (1074bp) protein (358aa)
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLY5_NOCSJ
inner-membrane translocator
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:ABL82820.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Noc
cn_combo_scaffold_1623_9
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7420..8928)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNG4_9MICO
Lipase {ECO:0000313|EMBL:KGM16937.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;
ABC transporter-like protein
cn_combo_scaffold_1623_10
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8928..9941)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCI9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM80738.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ABC sugar transporter, periplasmic ligand binding protein
cn_combo_scaffold_1623_11
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10112..11200
DNA (1089bp) protein (363aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JVZ4_ARTS2
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDO24342.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="M
periplasmic binding protein/LacI transcriptional regulator
cn_combo_scaffold_1623_12
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11194..11931
DNA (738bp) protein (246aa)
IclR family transcriptional regulator n=1 Tax=Ochrobactrum anthropi RepID=UPI000287B105
IclR family protein regulator {ECO:0000313|EMBL:CDO24343.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
iclR; transcriptional regulator
cn_combo_scaffold_1623_trna_2
unknown

Not on your lists

comp(12248..12336)
DNA (89bp)
transferRNA
cn_combo_scaffold_1623_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12412..13743)
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000318B225
LytR family transcriptional regulator {ECO:0000313|EMBL:EXJ51357.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS
transcriptional regulator
cn_combo_scaffold_1623_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13740..15068)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002FEC9D7
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAJ75082.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain St
cn_combo_scaffold_1623_trna_1
unknown

Not on your lists

comp(15128..15212)
DNA (85bp)
transferRNA
cn_combo_scaffold_1623_15
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15347..16255)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003622F3C
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CDJ99632.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp.
hydrolase of the HAD superfamily
cn_combo_scaffold_1623_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16252..17550)
DNA (1299bp) protein (433aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=2 Tax=Microbacterium RepID=H8E937_9MICO
seryl-tRNA synthetase
cn_combo_scaffold_1623_17
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17595..18743
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E10DDD
Sphingosine kinase and enzyme {ECO:0000313|EMBL:GAD33913.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sphingosine kinase and enzyme
cn_combo_scaffold_1623_18
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18848..20200
DNA (1353bp) protein (451aa)
deoxyribodipyrimidine photo-lyase n=1 Tax=Microbacterium yannicii RepID=UPI0002EE79CB
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EZP28282.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
deoxyribodipyrimidine photolyase
cn_combo_scaffold_1623_19
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20284..21333
DNA (1050bp) protein (350aa)
luciferase n=1 Tax=Microbacterium RepID=UPI000380CFA4
Luciferase family oxidoreductase, group 1 {ECO:0000313|EMBL:EZP28289.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium olei
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
cn_combo_scaffold_1623_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21370..22344)
DNA (975bp) protein (325aa)
prephenate dehydratase n=1 Tax=Microbacterium yannicii RepID=UPI00035EF2A9
Prephenate dehydratase {ECO:0000313|EMBL:KHK97842.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
pheA; prephenate dehydratase
cn_combo_scaffold_1623_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22399..24039
DNA (1641bp) protein (547aa)
phosphoglucomutase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037BEABE
pgm; phosphoglucomutase
Phosphoglucomutase {ECO:0000313|EMBL:BAJ75065.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).
cn_combo_scaffold_1623_22
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24219..25211
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003777207
Putative Zinc-dependant dehydrogenase {ECO:0000313|EMBL:CDJ99477.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C44
zinc-binding dehydrogenase rbh
cn_combo_scaffold_1623_23
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25273..26190
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037916A6
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH66453.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain A
cn_combo_scaffold_1623_24
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26187..26924
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Nocardiopsis xinjiangensis RepID=UPI0003499977
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH66452.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain A
cn_combo_scaffold_1623_25
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27088..28098
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037C57F4
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADD43355.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauen
cn_combo_scaffold_1623_26
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28132..29910
DNA (1779bp) protein (593aa)
xenobiotic-transporting ATPase (EC:3.6.3.44) rbh
ABC transporter n=1 Tax=Microbacterium yannicii RepID=UPI0002F0795D
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:EZP29190.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
cn_combo_scaffold_1623_27
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29945..31030
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000370109E
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94976.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M
oxidoreductase domain-containing protein rbh
cn_combo_scaffold_1623_28
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31023..32009
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000313EB3F
Beta-xylosidase {ECO:0000313|EMBL:EZP29191.1}; TaxID=273677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
hypothetical protein
Displaying items 1-30 of 51 in total

View Taxonomy