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cn_combo_scaffold_3095

Alias: MIC18_144

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3095_1
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..98
DNA (96bp) protein (32aa)
Transposase, IS4 family n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M3Q9_ARTPP
transposase, IS4 family
Transposase, IS4 family {ECO:0000313|EMBL:ADX73344.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DS
cn_combo_scaffold_3095_2
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(210..1142)
DNA (933bp) protein (311aa)
exporter DMT family membrane protein n=1 Tax=Humibacter albus RepID=UPI0003B5AAA4
Multidrug DMT transporter permease {ECO:0000313|EMBL:KGJ82789.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense
hypothetical protein
cn_combo_scaffold_3095_3
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1139..1489)
DNA (351bp) protein (117aa)
UPI0003C7F8B6 related cluster n=1 Tax=unknown RepID=UPI0003C7F8B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY20111.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter si
cn_combo_scaffold_3095_4
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1638..2621
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D7BAE3
16S rRNA uridine-516 pseudouridylate synthase {ECO:0000313|EMBL:CDK00029.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
16S rRNA uridine-516 pseudouridylate synthase
cn_combo_scaffold_3095_5
Nesterenkonia sp. AN1, Nesterenkonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2730..3080
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003753C93
HNH endonuclease {ECO:0000313|EMBL:EXF25803.1}; TaxID=652017 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Nesterenkonia.;" source="Nesterenkonia sp. AN1.;"
nuclease
cn_combo_scaffold_3095_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3101..3655)
DNA (555bp) protein (185aa)
XRE family transcriptional regulator n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00035E3C4F
HTH-type transcriptional regulator PuuR {ECO:0000313|EMBL:KJL37207.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsen
XRE family transcriptional regulator
cn_combo_scaffold_3095_7
Dietzia sp. UCD-THP, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3725..5284
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Dietzia sp. UCD-THP RepID=UPI000363186B
Methyltransferase type 12 {ECO:0000313|EMBL:EYT57024.1}; TaxID=1292020 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia sp. UCD-THP.;"
hypothetical protein
cn_combo_scaffold_3095_8
unknown

Not on your lists

5385..5537
DNA (153bp) protein (51aa)

This feature has no annotations

cn_combo_scaffold_3095_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5534..5761
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003196A4B
Uncharacterized protein {ECO:0000313|EMBL:CDK00633.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_3095_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5811..7187)
DNA (1377bp) protein (459aa)
Beta-lactamase class A n=1 Tax=Microbacterium sp. TS-1 RepID=U2YKT1_9MICO
Beta-lactamase class A {ECO:0000313|EMBL:GAD33589.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
conserved secreted protein
cn_combo_scaffold_3095_11
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7297..8010)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000309C6A4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN00146.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiga
cn_combo_scaffold_3095_12
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7997..8362)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EA6161
RNA polymerase sigma factor SigL {ECO:0000313|EMBL:KDP91840.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis
sigX; RNA polymerase ECF-subfamily sigma factor
cn_combo_scaffold_3095_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8517..9227
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036ADA8F
Uncharacterized protein {ECO:0000313|EMBL:CDK01972.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
cn_combo_scaffold_3095_14
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9224..9898
DNA (675bp) protein (225aa)
Putative sortase n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CM64_CLAM3
putative sortase
Putative sortase {ECO:0000313|EMBL:CAN00149.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis
cn_combo_scaffold_3095_15
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9900..10652)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003177CE5
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KCB40939.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetel
iron ABC transporter ATP-binding protein
cn_combo_scaffold_3095_16
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10654..11640)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E1BE04
transporter permease
Transport system permease protein {ECO:0000313|EMBL:ACL41739.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (s
cn_combo_scaffold_3095_17
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11637..12587)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F39B78
transport system permease
Transport system permease protein {ECO:0000313|EMBL:ABV98261.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (st
cn_combo_scaffold_3095_18
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12646..13692)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00036A0204
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB13203.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="De
periplasmic binding protein
cn_combo_scaffold_3095_19
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13785..14138)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B77D8E
Uncharacterized protein {ECO:0000313|EMBL:CDK01843.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
aspartyl-tRNA synthetase
cn_combo_scaffold_3095_20
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14284..14817)
DNA (534bp) protein (178aa)
Putative lipoprotein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MV42_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:EGS30415.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 s
cn_combo_scaffold_3095_21
Bradyrhizobium sp. UASWS1016, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15898..16680
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Acaricomes phytoseiuli RepID=UPI00037FC9E4
Contig102, whole genome shotgun sequence {ECO:0000313|EMBL:KIU56042.1}; TaxID=1566379 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="
hypothetical protein
cn_combo_scaffold_3095_22
unknown

Not on your lists

16711..16860
DNA (150bp) protein (50aa)

This feature has no annotations

cn_combo_scaffold_3095_23
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17284..18375
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003493548
Phytoene dehydrogenase {ECO:0000313|EMBL:EYT60608.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
phytoene dehydrogenase
Displaying 23 items

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